Return to main results Retrieve Phyre Job Id

Job DescriptionP05052
Confidence71.05%DateThu Jan 5 10:58:39 GMT 2012
Rank243Aligned Residues44
% Identity2%Templatec2qkoA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:possible transcriptional regulator, tetr family protein; PDBTitle: crystal structure of transcriptional regulator rha06399 from2 rhodococcus sp. rha1
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170....
Predicted Secondary structure 












Query SS confidence 











































Query Sequence  LTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLR
Query Conservation            
   
        

  

     
   
 
 

Alig confidence 











































Template Conservation 



  

 

  
    
    
   

  



    
  
 
Template Sequence  PERRAALVNAAIEVLAREGARGLTFRAVDVEANVPKGTASNYFP
Template Known Secondary structure 
T
TTT

SSSTTT

S
Template Predicted Secondary structure 














Template SS confidence 











































   5....10.........20.........30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions