 |
Job Description | P05052 | Confidence | 94.34% | Date | Thu Jan 5 10:58:39 GMT 2012 |
Rank | 51 | Aligned Residues | 48 |
% Identity | 10% | Template | c2q30C_ |
PDB info |
PDB header:unknown function | Chain: C: PDB Molecule:uncharacterized protein; |
PDBTitle: crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution
|
Resolution | 1.94 Å |
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | |
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  | . |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | F | I | C | Q | S | F | D | L | . |
I | I | N | R | R | V | I | S | F | K | K | N | S | L | F | I | V | S | D | K | I | R | R | E | L | P | V | C | P | S | K | L | R | I | V | D | I | D |
Query Conservation |   |
|
|   |
|   |   |   |   |   |   | . |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
Template Sequence |   |
I | V | V | L | E | G | E | G | E | F | V | G | D | G | D | A | V | I | P | A | P | R | G | A | V | L | V | A | P | I | S | T | P | H | G | V | R | A | V | T | D | X | K | V | L | V | T | I | A |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|  |  |  |  |
| G | G | G |
|  |  |  |  |
| T | T |
|  |  |  |  |  | T | T | S |
|  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|