Job Description P05052 Confidence 44.54% Date Thu Jan 5 10:58:39 GMT 2012 Rank 414 Aligned Residues 87 % Identity 17% Template c1b0nA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:protein (sinr protein); PDBTitle: sinr protein/sini protein complex Resolution 1.90 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	I	T	G	I	I	S	F	N	I	E	R	Q	W	H	L	K	D	I	A	E	L	I	Y	T	S	E	S	L	I	K	K	R	L	R	D	E	G	T	S	F	T	E	I	L	R	D	T	R	M	R	Y	A	K	K	L	I	T	S	N	S	Y	S	I	N	V	V	A	Q	K	C	G	Y	N	S	T	S	Y	F
Query Conservation
Alig confidence											.	.	.																																.	.	.	.	.	.	.
Template Conservation											.	.	.																																.	.	.	.	.	.	.
Template Sequence		Q	R	I	K	Q	Y	R	K	E	.	.	.	K	G	Y	S	L	S	E	L	A	E	K	A	G	V	A	K	S	Y	L	S	S	I	E	R	N	L	Q	T	N	P	S	.	.	.	.	.	.	.	I	Q	F	L	E	K	V	S	A	V	L	D	V	S	V	H	T	L	L	D	E	K	H	E	T	L	D	S	E	W
Template Known Secondary structure											.	.	.	T	T											T											T	T			S				.	.	.	.	.	.	.												T										T	T
Template Predicted Secondary structure											.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		219	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		I	C	A	F	K	D	Y	.	.	Y	G	V	T	P	S	H	Y	F	E
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		E	K	L	V	R	D	A	M	T	S	G	V	S	K	K	Q	F	R	E
Template Known Secondary structure											S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions