 |
Job Description | P0CF27 | Confidence | 3.28% | Date | Thu Jan 5 11:30:49 GMT 2012 |
Rank | 80 | Aligned Residues | 24 |
% Identity | 33% | Template | d1baia_ |
SCOP info | Acid proteases
| Acid proteases
| Retroviral protease (retropepsin)
|
Resolution | 2.40 |
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | R | P | Q | S | V | T | S | R | I | Q | P | G | S | D | V | I | V | C | A | E | M | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
Template Sequence |   |
K | Q | R | S | V | Y | I | T | A | L | L | D | T | G | A | D | D | T | V | I | S | E | E | D |
Template Known Secondary structure |   |
S |
| S | B |
|
|  |  |  |  |  |
| T | T |
| S | S |
|  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|