Job Description P0CF27 Confidence 5.92% Date Thu Jan 5 11:30:49 GMT 2012 Rank 40 Aligned Residues 43 % Identity 16% Template c2zkrl_ PDB info PDB header:ribosomal protein/rna Chain: L: PDB Molecule:rna expansion segment es20; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		G	N	R	P	H	Y	G	R	W	P	Q	.	H	D	F	P	P	F	K	K	L	R	P	Q	S	V	T	S	R	I	Q	P	G	S	D	V	I	V	C	A	E	M	D	E
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		G	M	H	H	H	R	I	N	F	D	K	Y	H	S	F	C	P	T	V	N	L	D	K	P	W	T	L	V	S	E	Q	T	R	V	N	A	A	K	N	K	T	G	V	A
Template Known Secondary structure		T	T	T	T	T		S	S		T	T	T									T							T	T	T	T	T	S	S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions