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Job DescriptionP0CF27
Confidence90.91%DateThu Jan 5 11:30:49 GMT 2012
Rank10Aligned Residues100
% Identity18%Templatec1c0mA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (integrase); PDBTitle: crystal structure of rsv two-domain integrase
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   40.........50.........60.........70.........80.........90.. .......100.........110
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Query Sequence  CAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSP. . FDVVIWMTDGWPLYESRL. . . . . . .
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Template Sequence  IWQTDF. . TLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAVQHHWATAIAVLGRPKAIKTDNGSCFTSKSTREWLAR
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   60..... ....70.........80.........90.........100.........110.........120.........130.......
 
   111........120.... .....130.........140.
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Query Sequence  KGKLHVISKRYTQR. . . . IERHNLNLRQHLARLGR
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Template Sequence  WGIAHTTGIPGNSQGQAMVERANRLLKDRIRVLAE
Template Known Secondary structure  T


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   138.140.........150.........160.........170..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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