 |
Job Description | P0A8G0 | Confidence | 84.71% | Date | Thu Jan 5 11:07:45 GMT 2012 |
Rank | 106 | Aligned Residues | 76 |
% Identity | 20% | Template | d1kg2a_ |
SCOP info | DNA-glycosylase
| DNA-glycosylase
| Mismatch glycosylase
|
Resolution | 1.20 |
|
 |
  |   |
529 | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 560 | |
|
|
|
. | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 590 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |
|
|
|  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . |  |
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | Q | H | I | R | D | E | S | H | D | H | A | I | G | G | H | R | K | K | R | A | K | . |
. |
. |
. |
. |
V | K | N | T | S | S | L | E | T | . |
. |
. |
. |
I | E | G | V | G | P | K | R | R | Q | M | L | L | K | Y | M | G | G | L | Q | G | L | R | . |
. |
. |
. |
. |
N | A | S | V | E | E | I | A | K | V | P |
Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|   |
| . | . | . | . | . |   |   |   |   |
|   |
|
|   | . | . | . | . |
|   |
|
|
|   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |
|   | . | . | . | . | . |   |
|
|   |
|
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   | . | . | . |   |
|   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
M | L | Q | Q | T | Q | V | A | . |
. |
. |
T | V | I | P | Y | F | E | R | F | M | A | R | F | P | T | V | T | D | L | A | N | A | P | L | D | E | V | L | H | L | W | T | G | L | G | Y | Y | A | R | A | R | N | L | H | K | A | A | Q | Q | V | A | T | L | H | G | G | K | F | P | E | T | F | E | E | V | A | A | L | P |
Template Known Secondary structure |   |
 |  | T | S | S |
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | T | T | S |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S |
|
|
| S |  |  |  |  |  | T | S | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | |
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
595 | . | . | . | . | 600 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | S | Q | G | L | A | E | K | I | F | W | S |
Query Conservation |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|   |   |
|
|   |   |
Template Sequence |   |
G | V | G | R | S | T | A | G | A | I | L | S | L |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|