Job Description P0A8G0 Confidence 97.24% Date Thu Jan 5 11:07:45 GMT 2012 Rank 38 Aligned Residues 107 % Identity 18% Template c3dlbA_ PDB info PDB header:nucleic acid binding protein/dna Chain: A: PDB Molecule:argonaute; PDBTitle: crystal structure of the guide-strand-containing argonaute2 protein silencing complex Resolution 2.70 Å

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		395	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.		.	.	460	.	.	.	.	.			.	.
Predicted Secondary structure															.																															.	.																					.									.	.			.
Query SS confidence															.																															.	.																					.									.	.			.
Query Sequence		M	E	C	F	D	I	S	H	T	M	G	E	Q	.	T	V	A	S	C	V	V	F	D	A	N	G	P	L	R	A	E	Y	R	R	Y	N	I	T	G	I	T	P	G	D	.	.	D	Y	A	A	M	N	Q	V	L	R	R	R	Y	G	K	A	I	D	D	S	.	K	I	P	D	V	I	L	I	.	.	D	G	.
Query Conservation															.																															.	.																					.									.	.			.
Alig confidence															.													.	.	.	.	.														.	.																					.									.	.			.
Template Conservation																												.	.	.	.	.
Template Sequence		A	V	G	F	D	A	G	G	R	E	S	F	R	F	G	G	A	A	C	A	V	G	G	D	G	G	.	.	.	.	.	H	L	L	W	T	L	P	E	A	Q	A	G	E	R	I	P	Q	E	V	V	W	D	L	L	E	E	T	L	W	A	F	R	R	K	A	G	R	L	P	S	R	V	L	L	L	R	D	G	R
Template Known Secondary structure								T	T		S	S	S	S	S									S	T	T		.	.	.	.	.												S	S																							S	S			S								T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.						500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
			468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	K	G	Q	L	A	Q	A	K	N	V	F	A	E	L	D	V	S	W	D	K	N	H	P	L	L	L	G	V	A	K	G	A	D	R	K	A	G	L	E	T	L	F	F	E	P	E	G	E	G
Query Conservation		.
Alig confidence		.																			.	.	.	.	.									.	.						.	.	.	.
Template Conservation																					.	.	.	.	.									.	.						.	.	.	.
Template Sequence		V	P	Q	D	E	F	A	L	A	L	E	A	L	A	R	E	G	I	A	.	.	.	.	.	Y	D	L	V	S	V	R	K	.	.	S	G	G	G	R	.	.	.	.	V	Y	P	V	Q	G	R	L
Template Known Secondary structure		S		G	G	G	G											T			.	.	.	.	.								S	.	.	S	S				.	.	.	.				S	S	S
Template Predicted Secondary structure																					.	.	.	.	.									.	.						.	.	.	.
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.						.	.	570	.	.	.	.	.			.	.	.	.	580					.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions