Job Description P0A8G0 Confidence 82.76% Date Thu Jan 5 11:07:45 GMT 2012 Rank 110 Aligned Residues 121 % Identity 12% Template c2w42A_ PDB info PDB header:protein/dna complex Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the structure of a piwi protein from archaeoglobus fulgidus2 complexed with a 16nt dna duplex. Resolution 1.90 Å

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		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.			.	.	460	.	.	.	.			.	.	.
Predicted Secondary structure																																															.																			.	.								.	.				.	.
Query SS confidence																																															.																			.	.								.	.				.	.
Query Sequence		M	E	C	F	D	I	S	H	T	M	G	E	Q	T	V	A	S	C	V	V	F	D	A	N	G	P	L	R	A	E	Y	R	R	Y	N	I	T	G	I	T	P	G	D	D	Y	.	A	A	M	N	Q	V	L	R	R	R	Y	G	K	A	I	D	D	S	.	.	K	I	P	D	V	I	L	.	.	I	D	G	.	.
Query Conservation																																															.																			.	.								.	.				.	.
Alig confidence																											.	.	.	.																	.																			.	.								.	.				.	.
Template Conservation																											.	.	.	.
Template Sequence		I	I	G	T	G	A	T	R	I	D	N	V	N	L	F	C	F	A	M	V	F	K	K	D	G	.	.	.	.	T	M	L	W	N	E	I	S	P	I	V	T	S	S	E	Y	L	T	Y	L	K	S	T	I	K	K	V	V	Y	G	F	K	K	S	N	P	D	W	D	V	E	K	L	T	L	H	V	S	G	K	R
Template Known Secondary structure										S	S	S	S											T	T	S	.	.	.	.													G	G	G																					T	T				S								S	S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
					468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure		.	.	.																							.
Query SS confidence		.	.	.																							.
Query Sequence		.	.	.	G	K	G	Q	L	A	Q	A	K	N	V	F	A	E	L	D	V	S	W	D	K	N	.	H	P	L	L	L	G	V	A	K	G	A	D	R	K	A	G	L	E	T	L	F	F	E	P	E	G	E	G	F	S	L	P	P	D
Query Conservation		.	.	.																							.
Alig confidence		.	.	.																							.																	.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		P	K	M	K	D	G	E	T	K	I	L	K	E	T	V	E	E	L	K	K	Q	E	M	V	S	R	D	V	K	Y	A	I	L	H	L	N	E	T	H	P	F	W	.	.	.	.	V	M	G	Y	E	G	T	K	V	K	L	S	S	K
Template Known Secondary structure			S																			T	T	S	S		T	T																.	.	.	.						S					S	S	S	S
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions