Job Description P0A8G0 Confidence 96.47% Date Thu Jan 5 11:07:45 GMT 2012 Rank 47 Aligned Residues 126 % Identity 16% Template c2izoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flap structure-specific endonuclease; PDBTitle: structure of an archaeal pcna1-pcna2-fen1 complex Resolution 2.9 Å

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		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	R	R	Y	G	K	A	I	D	D	S	K	I	P	D	V	I	L	I	D	G	G	K	G	Q	L	A	Q	A	K	N	V	F	A	E	L	D	V	S	W	D	K	N	H	P	L	L	L	G	V	A	K	G	A	D	R	K	A	G	L	E	T	L	F	F	E	P	E	G	E	G	F	S	L	P	P	D	S
Query Conservation
Alig confidence																		.																							.	.	.	.	.	.	.																	.	.	.
Template Conservation																		.																							.	.	.	.	.	.	.																	.	.	.
Template Sequence		G	L	F	Y	R	T	I	N	I	L	E	E	G	V	I	P	.	I	Y	V	F	D	G	S	N	I	M	V	E	E	S	K	K	L	L	R	A	M	G	.	.	.	.	.	.	.	I	P	I	V	Q	A	P	S	E	G	E	A	E	A	A	Y	.	.	.	L	N	K	L	G	L	S	W	A	A	A	S	Q	D	Y
Template Known Secondary structure														T				.																						T	.	.	.	.	.	.	.							S	S									.	.	.				T	T	S	S	S					S	S	S
Template Predicted Secondary structure																		.																							.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		525	.	.	.	.																						530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.		.		.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.		.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.		.
Query Sequence		P	A	L	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	H	I	R	D	E	S	H	D	H	A	I	G	G	H	R	K	K	R	A	K	V	K	N	T	S	S	.	L	.	E	T	I	E	G	V	G	P	K	R	R	Q	M	L	L	K	Y	M	G	G	L	Q	G
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.		.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																			.		.
Template Conservation																																			.	.	.
Template Sequence		D	A	I	L	F	G	A	K	R	L	V	R	N	L	T	I	Y	V	E	I	K	P	E	L	I	E	T	E	I	L	L	K	K	.	.	.	L	G	I	T	R	E	Q	L	I	D	I	G	I	L	I	G	T	D	Y	N	P	D	G	I	R	G	I	G	P	E	R	A	L	K	I	I	K	K	Y	G	K	I	I	D
Template Known Secondary structure						T	T		S					S	S																				.	.	.		T																S	S	S	T	T		S	T	T													S	S				T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		582	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		277	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions