Job Description P76461 Confidence 100.00% Date Thu Jan 5 12:23:06 GMT 2012 Rank 12 Aligned Residues 347 % Identity 39% Template c3svkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:acetyl-coa acetyltransferase; PDBTitle: crystal structure of acetyl-coa acetyltransferase from mycobacterium2 avium Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																							.
Query SS confidence																			.																							.
Query Sequence		K	N	C	V	I	V	S	A	V	R	T	A	I	G	S	F	N	.	G	S	L	A	S	T	S	A	I	D	L	G	A	T	V	I	K	A	A	I	E	R	.	A	K	I	D	S	Q	H	V	D	E	V	I	M	G	N	V	L	Q	A	G	L	G	Q	N	P	A	R	Q	A	L	L	K	S	G	L	A	E	T	V
Query Conservation																			.																							.
Alig confidence																			.																							.																	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.													.	.	.	.
Template Sequence		E	E	A	F	I	Y	E	A	I	R	T	P	R	G	K	Q	K	N	G	S	L	T	E	V	K	P	L	N	L	V	V	G	L	V	D	E	L	R	R	R	Y	P	D	L	D	E	T	L	I	S	D	M	I	L	G	V	V	.	.	.	.	.	.	.	D	I	A	R	T	A	V	L	A	A	G	L	.	.	.	.
Template Known Secondary structure																	S	S	S	S	T	T	T	T	S																	S	T	T			G	G	G										.	.	.	.	.	.	.										T	T		.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	F	T	V	N	K	V	C	G	S	G	L	K	S	V	A	L	A	A	Q	A	I	Q	A	G	Q	A	Q	S	I	V	A	G	G	M	E	N	M	S	L	A	P	Y	L	L	D	A	K	A	R	S	G	Y	R	L	G	D	G	Q	V	Y	D	V	I	L	R	D	G	L	M	C	A	T	H	G	Y	H	M	G
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	T	T	G	G	V	Q	L	N	S	G	L	E	A	V	N	T	A	A	Q	K	V	R	S	G	W	D	D	L	V	L	A	G	G	V	E	S	M	W	A	T	D	P	E	T	N	Y	R	I	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	Q	G
Template Known Secondary structure			T	T																							T	S		S													B		T	T	T			B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																									.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.											210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	A	E	N	V	A	K	E	Y	G	I	T	R	E	M	Q	D	E	L	A	L	H	S	Q	R	K	A	A	A	A	I	E	S	G	A	F	T	A	E	I	V	P	V	N	V	V	T	R	K	.	.	.	.	.	.	.	.	.	.	K	T	F	V	F	S	Q	D	E	F	P	K	A	N	S	T	A	E	A	L
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	A	D	L	I	A	T	L	E	G	F	S	R	E	D	V	D	A	Y	A	L	R	S	Q	Q	K	A	A	A	A	W	S	G	G	Y	F	A	K	S	V	V	P	V	R	D	Q	N	G	L	V	I	L	D	H	D	E	H	M	R	P	D	T	T	M	E	G	L	A	K	L	K	T	A	F	D	L	Q	K	Y
Template Known Secondary structure												T																							T	T	T	T	T	T	T	B						T	T							S		T	T			T	T								T	S		B	S					S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	R	P	A	F	D	K	A	G	T	V	T	A	G	N	A	S	G	I	N	D	G	A	A	A	L	V	I	M	E	E	S	A	A	L	A	A	G	L	T	P	L	A	R	I	K	S	Y	A	S	G	G	V	P	P	A	L	M	G	M	G	P	V	P	A	T	Q	K	A	L	Q	L	A	G	L	Q	L	A
Query Conservation
Alig confidence											.	.	.																																										.	.	.	.	.	.
Template Conservation											.	.	.																																										.	.	.	.	.	.
Template Sequence		H	W	V	E	K	I	N	H	V	.	.	.	H	T	G	G	N	S	S	G	I	V	D	G	A	A	L	V	L	V	G	S	E	K	A	G	K	S	Q	G	L	T	P	R	A	R	I	V	A	T	A	T	S	.	.	.	.	.	.	M	L	T	G	P	T	P	A	T	R	K	V	L	D	R	A	G	L	T	I	D
Template Known Secondary structure		T	T			S					.	.	.		B	T	T	T	B			B																		T	T														.	.	.	.	.	.				T												T	T			G	G
Template Predicted Secondary structure											.	.	.																																										.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.							.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	L	I	E	A	N	E	A	F	A	A	Q	F	L	A	V	G	K	N	L	G	F	D	S	E	K	V	N	V	N	G	G	A	I	A	L	G	H	P	I	G	A	S	G	A	R	I	L	V	T	L	L	H	A	M	Q	A	R	D	K	T	L	G	L	A	T	L	C	I	G	G	G	Q	G	I	A	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	D	L	F	E	L	N	E	A	F	A	S	V	V	L	K	F	Q	K	D	L	N	I	P	D	E	K	L	N	V	N	G	G	A	I	A	M	G	H	P	L	G	A	T	G	A	M	I	T	G	T	M	V	D	E	L	E	R	R	N	A	R	R	A	L	I	T	L	C	I	G	G	G	M	G	V	A	T	I
Template Known Secondary structure		G		S							S	B												T			G	G	G	B	S	T	T								B		G	G	G																	T											S	S	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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