Job Description P76461 Confidence 100.00% Date Thu Jan 5 12:23:06 GMT 2012 Rank 11 Aligned Residues 372 % Identity 44% Template c3goaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-ketoacyl-coa thiolase; PDBTitle: crystal structure of the salmonella typhimurium fada 3-2 ketoacyl-coa thiolase Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																		.																								.																				.
Query SS confidence																		.																								.																				.
Query Sequence		M	K	N	C	V	I	V	S	A	V	R	T	A	I	G	S	.	F	N	G	S	L	A	S	T	S	A	I	D	L	G	A	T	V	I	K	A	A	I	E	.	R	A	K	I	D	S	Q	H	V	D	E	V	I	M	G	N	V	L	Q	.	A	G	L	G	Q	N	P	A	R	Q	A	L	L	K	S	G	L	A	E
Query Conservation																		.																								.																				.
Alig confidence																		.																								.																				.
Template Conservation
Template Sequence		X	E	Q	V	V	I	V	D	A	I	R	T	P	X	G	R	S	K	G	G	A	F	R	N	V	R	A	E	D	L	S	A	H	L	X	R	S	L	L	A	R	N	P	S	L	T	A	A	T	L	D	D	I	Y	W	G	C	V	Q	Q	T	L	E	Q	G	F	N	I	A	R	N	A	A	L	L	A	E	I	P	H
Template Known Secondary structure																		T	T	T		T	T	T	T	S																		T	T	S		G	G	G									S			S	G	G	G	T	T	T									T	T			T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	C	G	F	T	V	N	K	V	C	G	S	G	L	K	S	V	A	L	A	A	Q	A	I	Q	A	G	Q	A	Q	S	I	V	A	G	G	M	E	N	M	S	L	A	P	Y	L	L	D	A	K	A	R	S	G	Y	R	L	G	D	G	Q	V	Y	D	V	I	L	R	D	G	L	M	C	A	T	H	G	Y	H
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	P	A	V	T	V	N	R	L	C	G	S	S	X	Q	A	L	H	D	A	A	R	X	I	X	T	G	D	A	Q	V	C	L	V	G	G	V	E	H	X	G	H	V	P	X	S	H	G	V	D	F	H	P	G	L	S	G	X	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S								G	G	G															T	T	S		S										T	T	T	S		T	T	T	T					T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		M	G	I	T	A	E	N	V	A	K	E	Y	G	I	T	R	E	M	Q	D	E	L	A	L	H	S	Q	R	K	A	A	A	A	I	E	S	G	A	F	T	A	E	I	V	P	V	N	V	V	T	R	K	K	T	F	V	F	.	S	Q	D	E	F	P	K	A	N	S	T	A	E	A	L	G	A	L	R	P	A	F
Query Conservation																																																											.
Alig confidence		.																																																									.
Template Conservation		.
Template Sequence		.	G	L	T	A	E	X	L	S	R	L	H	G	I	S	R	E	X	Q	D	Q	F	A	A	R	S	H	A	R	A	W	A	A	T	Q	S	G	A	F	K	T	E	I	I	P	T	G	G	H	D	A	D	G	V	L	K	Q	F	N	Y	D	E	V	I	R	P	E	T	T	V	E	A	L	S	T	L	R	P	A	F
Template Known Secondary structure		.											T	T																								T	T	T	T	T	T	B								T	T	S							S		T	T			T	T							T	T	S			S	S
Template Predicted Secondary structure		.
Template SS confidence
			148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		237	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		D	K	.	A	G	T	V	T	A	G	N	A	S	G	I	N	D	G	A	A	A	L	V	I	M	E	E	S	A	A	L	A	A	G	L	T	P	L	A	R	I	K	S	Y	A	S	G	G	V	P	P	A	L	M	G	M	G	P	V	P	A	T	Q	K	A	L	Q	L	A	G	L	Q	L	A	D	I	D	L	I	E
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		D	P	V	S	G	T	V	T	A	G	T	S	S	A	L	S	D	G	A	A	A	X	L	V	X	S	E	S	R	A	R	E	L	G	L	K	P	R	A	R	I	R	S	X	A	V	V	G	C	D	P	S	I	X	G	Y	G	P	V	P	A	S	K	L	A	L	K	K	A	G	L	S	A	S	D	I	D	V	F	E
Template Known Secondary structure			T	T	T					G	G	G	B																					T	T																	T	T	S	T	T		T													T			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.				.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		A	N	E	A	F	A	A	Q	F	L	A	V	G	K	N	L	G	F	D	S	E	.	.	.	K	V	N	V	N	G	G	A	I	A	L	G	H	P	I	G	A	S	G	A	R	I	L	V	T	L	L	H	A	M	Q	A	R	D	K	T	L	G	L	A	T	L	C	I	G	G	G	Q	G	I	A	M	V	I	E	R
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		X	N	E	A	F	A	A	Q	I	L	P	C	I	K	D	L	G	L	X	E	Q	I	D	E	K	I	N	L	N	G	G	A	I	A	L	G	H	P	L	G	C	S	G	A	R	I	S	T	T	L	I	N	L	X	E	R	K	D	A	Q	F	G	L	A	T	X	C	I	G	L	G	Q	G	I	A	T	V	F	E	R
Template Known Secondary structure					S	B											T	T		G	G	G					B	S	T	T																												T	T		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		393
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		387

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions