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Job DescriptionP76461
Confidence100.00%DateThu Jan 5 12:23:06 GMT 2012
Rank23Aligned Residues295
% Identity27%Templatec1tqyC_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-ketoacyl synthase/acyl transferase; PDBTitle: the actinorhodin ketosynthase/chain length factor
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10 ...... ...20........ .30.....
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Query Sequence  KNCVIVSAV. RTAIGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FNGSLASTSAID. . . . . . . . . LGATVIK
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Template Sequence  RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGFGPRELDRMDRASQFAVACAR
Template Known Secondary structure 

TTST





SS

TTSS






T

S
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   36...40......... 50......... 60.........70.........
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Query Sequence  AAIERAKIDSQHVD. . . . EVIMGNVLQA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLGQNPARQALLKSGLAETV
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Template Sequence  EAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGA. . EG
Template Known Secondary structure  T

TTT

GGG
SSTTTTTT
SS

GGG

TTTSTTT
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S
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   83......90.........100.........110.........120.........130.........140.........150........ .160
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  CGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMG
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Template Sequence  PVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARND. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 


GGGTTS
S


ST
B


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   161........170.........180.........190.........200.........210.........
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  ITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKA
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Template Conservation  .........................................................................      
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DPEHASR
Template Known Secondary structure  .........................................................................
GGG


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   220......
 
   240.........250.........260.........270.........280...... ...290.........300.........310....
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Query Sequence  GTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPP. . . . . ALMGMGPVPATQKALQLAGLQLADIDLI
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Template Sequence  PFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYI
Template Known Secondary structure  TT
TT

SB

TT





S
SS


TT
T

GGG
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   227..230.........240.........250.........260.........270.........280.........290.........300......
 
   315....320. ........330.........340...... ...350.........360.........
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Query Sequence  EANEAFA. . . . AQFLAVGKNLGFDSEKVNVNGGAIA. LGHPIGASGARILVTLLHAMQAR. . . . . . . . . . . . . . . . . . . .
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Template Sequence  NAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYV
Template Known Secondary structure 



S
GGGGSSS

T
B
TTTT

BTT

S
BTTB
S


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   307..310.........320.........330.........340.........350.........360.........370.........380......
 
   370.........380.........390..
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Query Sequence  . . . . . . . DKTLGLATLCIGGGQGIAMVIER
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Template Conservation              
  
 



 
  


  
Template Sequence  PLEARERKLRSVLTVGSGFGGFQSAMVLRD
Template Known Secondary structure  BSS



STTT
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   387..390.........400.........410......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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