Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEB2
Confidence100.00%DateThu Jan 5 11:22:55 GMT 2012
Rank38Aligned Residues230
% Identity17%Templated1djaa_
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80.........90.........100.........110.........120.......
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Query Sequence  SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVP
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Template Sequence  GVYALDTKSGKEV. KFNSDKRFAYASTSHAINSAILLEQVPYNK. . LNKKVHINKDDIVA. . . . . . YSPILEKYVGKDIT
Template Known Secondary structure  TTT

.STTS

GGGTSS
GGG..TT


GGG

S......S
TTGGGGTTS
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   45....50....... ..60.........70.........80....... ..90.........100. ........110.....
 
   128.130.........140.........150.........160.........170....... ..180.........190.........200.
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Query Sequence  VSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQ. . . . . . TVHGLDADGQYSSARDMALIGQAL
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Template Sequence  LKALIEASMTYSDNTANNKIIKEIGG. . . . . IKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKL
Template Known Secondary structure  S

T
.....TT

S





TTGGG


TT

TT
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   119120.........130.........140.... .....150.........160.........170.........180.........190...
 
   202.......210.........220.........230........ .240.........250 .........260... ......270......
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Query Sequence  IRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNV. DGIKTGHTDKAG. YNLVASATEGQMR. . LISAVMGGRTFKG.
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Template Sequence  IAN. GKLSKENKKFLLDLMLNNKSGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVIFTNKDNKSD
Template Known Secondary structure  TTS.SS


STTTTTS
TT

SSTT

TT

S

SSTT
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   194.. ...200.........210.........220.........230.........240.........250.........260.........270..
 
   277..280.........290..
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Query Sequence  . . REAESKKLLTWGFRFF
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Template Sequence  KPNDKLISETAKSVMKEF
Template Known Secondary structure 


TTT
Template Predicted Secondary structure 
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   273......280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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