Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEB2
Confidence100.00%DateThu Jan 5 11:22:55 GMT 2012
Rank36Aligned Residues230
% Identity13%Templatec3p09A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of beta-lactamase from francisella tularensis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80.........90.........100.........110.........120.......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVP
Query Conservation 





  

 

  

 
     

 





   

 
  
 
 

  
 

              
   
  
   
Alig confidence 









.....














































....













Template Conservation 

   
    ..... 
 
     

  

      
     
   
   
 
         ....             
Template Sequence  GIYTLNTNIK. . . . . YNESYHFPICSVFKFLLVGAILDYDXHNQGFLDKKIPINQDDIGKLG. . . . YAPITAKNVGKTLT
Template Known Secondary structure 



.....STTS

GGGSTTGGG


TT

....

TTGGG
TTS
Template Predicted Secondary structure 



.....





















....






Template SS confidence 















































































   37..40...... ...50.........60.........70.........80.........90... ......100.......
 
   128.130.........140.........150.........160.........170...... ...180.........190.........200.
Predicted Secondary structure 











......











Query SS confidence 
















































. . . . . .
























Query Sequence  VSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHF. . . . . . QTVHGLDADGQYSSARDMALIGQAL
Query Conservation 
 


   

 
 



 



 
 

   

  

  
 



  
 
...... 

 

      


 


 
    
Alig confidence 





.


















.....

















......
























Template Conservation     
  . 
  


 

  
     
.....   

     

   
                  
  

 
   

  
Template Sequence  ISQLNY. AAILSDSPASNILVRELGG. . . . . LQNLNKFIKKLGDNDTIITADEPEINYTQPHSNINKTTPKAITKDIYKL
Template Known Secondary structure  .TT
T
.....TT

S
B



TTGGG


TT

TT
Template Predicted Secondary structure  .





.....
























Template SS confidence 















































































   112..... ..120.........130...... ...140.........150.........160.........170.........180.....
 
   202.......210.........220.........230.........240.........250 ......... 260......... 270.....
Predicted Secondary structure 















.
.

....



Query SS confidence 
















































.








.









. . . .





Query Sequence  IRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAG. YNLVASATE. GQMRLISAVM. . . . GGRTFK
Query Conservation      
    
              
 
 

      
 
 


 
  

.  

  
  . 
   
 


....
     
Alig confidence 
















































.








.









....





Template Conservation       
           
                   
  


     
   
 


    
   
  
           
Template Sequence  AFGNILDKKHKDIFIKYLQDNNTGANRIAFSXPKDWIIGDKTGTCGQYAATNDVAIIWPKNQQPIALGILYTNPNDKNAP
Template Known Secondary structure  SSSS


TTTTTGGGGS
TTS
SSTT

TTS


TT
TT

Template Predicted Secondary structure 









































Template SS confidence 















































































   186...190.........200.........210.........220.........230.........240.........250.........260.....
 
   276...280.........290..
Predicted Secondary structure 
Query SS confidence 
















Query Sequence  GREAESKKLLTWGFRFF
Query Conservation   
      

   
   
Alig confidence 
















Template Conservation      

  
   
   
Template Sequence  SNEEIIQQAAKLIANDL
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 
















   266...270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions