Job Description P0AEB2 Confidence 98.88% Date Thu Jan 5 11:22:55 GMT 2012 Rank 79 Aligned Residues 230 % Identity 13% Template c3o3vB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of clbp peptidase domain Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	D	A	E	S	Y	I	L	I	D	Y	N	S	G	K	V	L	A	E	Q	N	A	D	V	R	R	D	P	A	S	L	T	K	M	M	T	S	Y	V	I	G	Q	A	M	K	A	G	K	F	K	E	T	D	L	V	T	I	G	N	D	A	W	A	T	G	N	P	V	F	K	G	S	S	L	M	F	L	K	P
Query Conservation
Alig confidence																				.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	Q	R	F	V	Y	G	V	A	D	V	A	S	Q	K	A	N	.	.	.	T	L	D	T	V	Y	E	L	G	S	M	S	K	A	F	T	G	L	V	V	Q	I	L	I	Q	E	G	R	L	R	Q	G	D	D	I	.	.	.	.	.	.	.	.	.	.	I	T	Y	L	P	E	M	R	L	N	Y	Q	G	K
Template Known Secondary structure													T	T	T	T				.	.	.		T	T		B				G	G	G	G														T	T	S			T	T	S	B		.	.	.	.	.	.	.	.	.	.					T	T						T	T
Template Predicted Secondary structure																				.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.																																					.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		G	M	Q	V	P	V	S	Q	L	I	R	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	Q	S	G	N	D	A	C	V	.	.	.	A	M	A	D	F	A	A	G	S	Q	D	A	F	V	G	L	M	N
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		P	A	S	L	T	V	A	D	F	L	Y	H	T	S	G	L	P	F	S	T	L	A	R	L	E	N	P	M	P	G	S	A	V	A	Q	Q	L	R	N	E	N	L	L	F	A	P	G	A	K	F	S	Y	A	S	A	N	Y	D	V	L	G	A	V	I	E	N	V	T	G	K	T	F	T	E	V	I	A	E	R	.
Template Known Secondary structure						B						T	T		S				T								S			S	S							S	T	T				S	S		T	T	S						T	T														S	S										.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																												.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		S	Y	V	N	A	L	G	L	K	N	T	H	F	Q	T	V	H	G	L	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	Y	S	S	A	R	D	M	A	L	I	G	Q	A	L	I	R	D	.	.	.	V	P	N	E	Y	S	I	Y	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation		.
Template Sequence		.	L	T	Q	P	L	G	M	S	A	T	V	A	V	K	G	D	E	I	I	V	N	K	A	S	G	Y	K	L	G	F	G	K	P	V	L	F	H	A	P	L	A	R	N	H	V	P	A	A	Y	I	H	S	T	L	P	D	M	E	I	W	I	D	A	W	L	H	R	K	A	L	P	A	T	L	R	E	A	M	S
Template Known Secondary structure		.	T					T		S	S						S	S				T	T	B				B			S	S	S			B				S				S	T	T					T																	T	G	G	G	S
Template Predicted Secondary structure		.
Template SS confidence
			214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		E	K	E	F	T	F	N	G	I	R	Q	L	N	R	N	G	L	L	W	D	N	S	L	N	V	D	G	I	K	T	G	H	T	D	K	A	G	Y	N	.	.	.	L	V	A	S	A	T	E	G	Q	M	R	L	I	S	A	V	M	G	G	R	T	F	K	G	R	E	A	E	S	K	K	L	L	T	W
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.
Template Conservation
Template Sequence		N	S	W	R	G	N	S	D	V	P	L	A	A	D	N	R	I	L	Y	A	S	G	W	F	I	D	Q	N	Q	G	P	Y	I	S	H	G	G	Q	N	P	N	F	S	S	C	I	A	L	R	P	D	Q	Q	I	G	I	V	A	L	A	N	M	N	S	N	L	I	L	Q	L	C	A	D	I	D	N	Y
Template Known Secondary structure				T					S	S				S	S							S	S						T	T	S										S	S									G	G	G	T								S	B
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions