Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEB2
Confidence100.00%DateThu Jan 5 11:22:55 GMT 2012
Rank34Aligned Residues232
% Identity13%Templatec3lezA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of a halotolerant bacterial beta-lactamase
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80.........90.........100.........110.........120.......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVP
Query Conservation 





  

 

  

 
     

 





   

 
  
 
 

  
 

              
   
  
   
Alig confidence 












.




























..














......













Template Conservation 

 
 
  

   .  
       

  

      
      .. 
             ......             
Template Sequence  GVYAIDTGADKEI. SYRENERFAYTSTFKPLAVGAVLQTKSDE. . ELEETITYSEEDLVT. . . . . . YSPITEQHVDEGMT
Template Known Secondary structure  TTTT.STTS
GGGG

..S


GGG

S......S
TTGGG
TTT
Template Predicted Secondary structure 




.











..







......













Template SS confidence 















































































   61........70... ......80.........90.........100.. .......110....... ..120.........130.
 
   128.130.........140.........150.........160.........170....... ..180.........190.........200.
Predicted Secondary structure 












......










Query SS confidence 

















































. . . . . .























Query Sequence  VSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQ. . . . . . TVHGLDADGQYSSARDMALIGQAL
Query Conservation 
 


   

 
 



 



 
 

   

  

  
 



  
 
 ......

 

      


 


 
    
Alig confidence 

























.....


















......























Template Conservation          
  


 

  
    
 .....           
   
                    

  
   

  
Template Sequence  LVEIADAAIRYSDNTAGNLLLEAMGG. . . . . PDELETILRDIGDETIEMDRYETELNEAKPGDIRDTSTAKAMATTLQQY
Template Known Secondary structure 

TTS.....TT

S
B



TTGGG


TT

TT
Template Predicted Secondary structure 




.....


























Template SS confidence 















































































   132.......140.........150....... ..160.........170.........180.........190.........200......
 
   202.......210.........220.........230........ .240.........250.........260... ...... 270.....
Predicted Secondary structure 











.






.....



Query SS confidence 




































.
























. .





. . .





Query Sequence  IRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNV. DGIKTGHTDKAGYNLVASATEGQMR. . LISAVM. . . GGRTFK
Query Conservation      
    
              
 
 

      
. 
 


 
  

  

  
   
  .. 
 


...
     
Alig confidence 


.
































.
























..





...





Template Conservation     .              
              
    
  



         
 
         

 
          
Template Sequence  VLE. DVLDADRREVLTNMLINNTTGDALIRAGVPDGWTVGDKTGAGGYGTRNDIGIIWPEGDEEPIVIAIMSSRDEEDAD
Template Known Secondary structure  TS.SSS
T
SS
TTTGGGGS
TT
TTT
TTT



SSTT

Template Predicted Secondary structure 
.





































Template SS confidence 















































































   207.. 210.........220.........230.........240.........250.........260.........270.........280.....
 
   276...280.........290....
Predicted Secondary structure 
Query SS confidence 


















Query Sequence  GREAESKKLLTWGFRFFET
Query Conservation   
      

   
     
Alig confidence 


















Template Conservation      

  
   
   
 
Template Sequence  YDDKLIEKATEIVLQELRN
Template Known Secondary structure 

TT
Template Predicted Secondary structure 

Template SS confidence 


















   286...290.........300....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions