|   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Y | I | L | I | D | Y | N | S | G | K | V | L | A | E | Q | N | A | D | V | R | R | D | P | A | S | L | T | K | M | M | T | S | Y | V | I | G | Q | A | M | K | A | G | K | F | K | E | T | D | L | . |
. |
. |
. |
. |
V | T | I | G | N | D | A | W | A | T | G | N | P | V | F | K | G | S | S | L | M | F | L | K | P |
Query Conservation |   |
|
|
|
|
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |
|
|   |
|   |   |
|   |
|   |
|
|   |   | . | . | . | . | . |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   | . |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | A | A | A | V | I | G | P | A | G | V | L | A | T | H | G | D | T | A | R | V | F | A | L | A | S | V | T | K | P | L | V | A | R | A | A | Q | V | A | V | E | E | G | V | V | N | L | D | T | P | A | G | P | P | G | S | T | V | R | H | L | L | A | H | T | S | G | L | A | X | . |
H | S | D | Q | A | L | A | R | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S |
| T | T |
|
|  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
| T | T | S | B |
| S | S | T | T |
| B |  |  |  |  |  | T | T |
| S |
| B |
| S | . | S | S | S |
| B |
| S |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . |
  |
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | M | Q | V | P | V | S | Q | L | I | R | G | I | N | L | Q | S | G | N | D | A | C | V | A | M | A | D | F | A | A | G | S | Q | D | A | F | V | G | L | M | N | S | Y | V | N | A | L | G | L | K | N | T | H | F | Q | T | V | H | G | L | D | A | D | G | Q | Y | S | S | A | R | D | M | A | L | I | G | Q | A | L | I |
Query Conservation |   |
|   |   |   |
|
|   |
|
|
|   |   |   |
|
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|   |   |
|   |
| . | . | . | . | . | . | . |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   | . | . |   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
G | T | R | R | X | Y | S | N | Y | G | F | T | V | . |
. |
. |
. |
. |
. |
. |
L | A | E | S | V | Q | R | E | S | G | I | E | F | G | R | Y | L | T | E | . |
. |
A | V | C | E | P | L | G | X | V | T | T | R | L | D | G | G | P | A | A | A | G | F | G | A | T | S | T | V | A | D | L | A | V | F | A | G | D | L | L |
Template Known Secondary structure |   |
T | S | S |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  | . | . |  | T |  |  |  |  | T |
| T | T |
|  |  |
| S | G | G | G | G | T | T | T |
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
  |
  |   |
203 | |
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . |
Predicted Secondary structure |   |
 | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | . |
. |
. |
. |
D | V | P | N | E | Y | S | I | Y | K | E | K | E | F | T | F | N | G | I | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | L | N | R | N | G | L | L | W | D | N | S | L | N | V | D | G | I | K | T | G | H | T | D | K | A | G | Y | N | L | V | A | S | A | T | E | G | Q | M | R |
Query Conservation |   |
  | . | . | . | . |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   | . | . | . |   |   |
|   |   |   |
Template Sequence |   |
R | P | S | T | V | S | A | Q | X | H | A | D | A | T | T | V | Q | F | P | G | L | D | G | V | L | P | G | Y | G | V | Q | R | P | N | D | W | G | L | G | F | E | I | R | N | S | K | S | P | H | W | T | G | E | C | N | S | T | R | T | F | G | H | F | G | Q | S | G | G | F | I | W | . |
. |
. |
V | D | P | K | A | D |
Template Known Secondary structure |   |
S |
|
| S | S |
|  |  |  |  |  |  |  | T | S |
| S | S | T | T |
|
|  |  |
| T | T | S |
|  |  | S | S |
|
| B |
| S | S | S |  |  |
| T | T |
| S | S |
| S | S |
| T | T | S |
| T | T |
|  |  |  |  |  | T | T | T |  |  |  |  | . | . | . |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | |
|
|
. | . | . | . | 240 | . |
  |
  |   |
264 | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
. | . | . | . | . | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | S | A | V | M | G | G | R | T | F | K | G | R | E | A | E | S | K | . |
K | L | L | T | W | G | F | R | F | F | E | T |
Query Conservation |   |
  |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   | . |   |
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |
|
Template Sequence |   |
L | A | L | V | V | L | T | A | R | D | F | G | D | W | A | L | D | L | W | P | A | I | S | D | A | V | L | A | E | Y | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S |
|
| S |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
  |