Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEB2
Confidence100.00%DateThu Jan 5 11:22:55 GMT 2012
Rank22Aligned Residues219
% Identity15%Templatec3cg5A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of the covalent adduct formed between tb2 b-lactamase and clavulanate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80.........90.........100.........110.........120.......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  SYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVP
Query Conservation 





  

 

  

 
     

 





   

 
  
 
 

  
 

              
   
  
   
Alig confidence 












.




























..














......













Template Conservation 

 
 
  

   .  
       

  
       
      ..               ......             
Template Sequence  GVYVPATGTTAAI. EYRADERFAFCSTFKAPLVAAVLHQNPLT. . HLDKLITYTSDDIRS. . . . . . ISPVAQQHVQTGMT
Template Known Secondary structure 


SS


.STTS

GGGGS
GG..GGG



GGG

S......

TTTTT
Template Predicted Secondary structure 




.











..






......







Template SS confidence 















































































   60.........70.. .......80.........90.........100. ........110...... ...120.........130
 
   128.130.........140.........150.........160.........170....... ..180.........190.........200.
Predicted Secondary structure 












......










Query SS confidence 

















































. . . . . .























Query Sequence  VSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQ. . . . . . TVHGLDADGQYSSARDMALIGQAL
Query Conservation 
 


   

 
 



 



 
 

   

  

  
 



  
 
 ......

 

      


 


 
    
Alig confidence 























.
























......























Template Conservation 
  
   

  


 

  
    .
               

   
                  
  

 
 
 

  
Template Sequence  IGQLCDAAIRYSDGTAANLLLADL. GGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQL
Template Known Secondary structure  S

.
SGGGGTT

S





TTGGG


TT

TT
Template Predicted Secondary structure 





.



























Template SS confidence 















































































   131........140.........150.... .....160.........170.........180.........190.........200.........
 
   202.......210.........220.........230....... ..240.........250......... 260.........270.......
Predicted Secondary structure 











.




.





Query SS confidence 



































.





















.

















Query Sequence  IRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLN. VDGIKTGHTDKAGYNLVASATE. GQMRLISAVMGGRTFKGR
Query Conservation      
    
              
 
 

      .
 
 


 
  

  

  
  . 
   
 



      
Alig confidence 


.































.





















.

















Template Conservation     .              
                      


          


    
   

 
         
Template Sequence  VLG. NALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGY
Template Known Secondary structure  TS.SSS
T
SS
TTTS
TTSTTT
TTS

GGG
T
Template Predicted Secondary structure 
.







































Template SS confidence 













































































   210.. .......220.........230.........240.........250.........260.........270.........280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions