Job Description P0AEB2 Confidence 100.00% Date Thu Jan 5 11:22:55 GMT 2012 Rank 4 Aligned Residues 325 % Identity 26% Template c1xp4C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:d-alanyl-d-alanine carboxypeptidase; PDBTitle: crystal structure of a peptidoglycan synthesis regulatory2 factor (pbp3) from streptococcus pneumoniae Resolution 2.80 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	D	A	E	S	Y	I	L	I	D	Y	N	S	G	K	V	L	A	E	Q	N	A	D	V	R	R	D	P	A	S	L	T	K	M	M	T	S	Y	V	I	G	Q	A	M	K	A	G	K	F	K	E	T	D	L	V	T	I	G	N	D	A	W	A	T	G	N	P	V	F	K	G	S	S	L	M	F	L	K	P
Query Conservation
Alig confidence																																																																						.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		T	I	A	A	K	H	A	I	A	V	E	A	N	T	G	K	I	L	Y	E	K	D	A	T	Q	P	V	E	I	A	S	I	T	K	L	I	T	V	Y	L	V	Y	E	A	L	E	N	G	S	I	T	L	S	T	P	V	D	I	S	D	Y	P	Y	Q	L	T	T	N	.	.	.	S	E	A	S	N	I	P	X	E
Template Known Secondary structure				S	B	S	S						T	T	T	T							S		S	S					G	G	G	G															T	S	S		T	T															S	.	.	.	S		S	S					T
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.															.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	M	Q	V	P	V	S	Q	L	I	R	G	I	N	L	Q	S	G	N	D	A	C	V	A	M	A	D	F	A	A	G	S	Q	D	A	F	V	G	L	M	N	S	Y	V	N	A	L	G	L	K	N	T	H	F	Q	T	V	H	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	G	Q	Y
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	N	Y	T	V	E	E	L	L	E	A	T	L	V	S	S	A	N	S	A	A	I	A	L	A	E	K	I	A	G	S	E	K	D	F	V	D	X	X	R	A	K	L	L	E	W	G	I	Q	D	A	T	V	V	N	T	T	G	L	N	N	E	T	L	G	D	N	I	Y	P	G	S	K	K	D	E	E	N	K
Template Known Secondary structure		T																														S	S															T	T			S		B				S	S				G	G	G	S	T	T		S		T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		S	S	A	R	D	M	A	L	I	G	Q	A	L	I	R	D	V	P	N	E	Y	S	I	Y	K	E	K	E	F	T	F	N	G	I	R	Q	L	N	R	N	G	L	L	W	D	.	.	.	N	S	L	N	V	D	G	I	K	T	G	H	T	D	K	A	G	Y	N	L	V	A	S	A	T	E	G	Q	M	R	L	I
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		L	S	A	Y	D	V	A	I	V	A	R	N	L	I	K	K	Y	P	Q	V	L	E	I	T	K	K	P	S	S	T	F	A	G	X	T	I	T	S	T	N	Y	X	L	E	G	X	P	A	Y	R	G	G	F	D	G	L	K	T	G	T	T	D	K	A	G	E	S	F	V	G	T	T	V	E	K	G	X	R	V	I
Template Known Secondary structure																			G	G	G					T		S					T	T						S		T	T	S	T	T	S	T	T			T	T										T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		266	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																														.	.
Query SS confidence													.	.	.	.																														.	.
Query Sequence		S	A	V	M	G	G	R	T	F	K	G	.	.	.	.	R	E	A	E	S	K	K	L	L	T	W	G	F	R	F	F	E	T	V	N	P	L	K	V	G	K	E	F	A	.	.	S	E	P	V	W	F	G	D	S	D	R	A	S	L	G	V	D	K	D	V	Y	L	T	I	P	R	G	R	M	K	D	L	K	A
Query Conservation													.	.	.	.																														.	.
Alig confidence													.	.	.	.																														.	.																														.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		T	V	V	L	N	A	D	H	Q	D	N	N	P	Y	A	R	F	T	A	T	S	S	L	X	D	Y	I	S	S	T	F	T	L	R	K	I	V	Q	Q	G	D	A	Y	Q	D	S	K	A	P	V	Q	D	G	K	E	D	T	V	I	A	V	A	P	E	D	I	Y	L	I	E	R	V	G	N	Q	.	.	.	.	.
Template Known Secondary structure											S	S		T	T																									T	T											S	S	S	S		S							S	S								S				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	V	L	N	S	S	E	L	H	A	P	L	Q	K	N	Q	V	V	G	T	I	N	F	Q	L	D	G	K	T	I	E	Q	R	P	L	V	V	L	Q	E
Query Conservation
Alig confidence		.	.	.	.																						.
Template Conservation		.	.	.	.																						.
Template Sequence		.	.	.	.	S	V	Q	F	T	P	D	S	L	E	A	G	T	V	V	G	H	L	T	Y	E	.	D	K	D	L	I	G	Q	G	Y	I	T	T	E	R	P
Template Known Secondary structure		.	.	.	.			B								T	T										.						T	T	S	B	S	S	S
Template Predicted Secondary structure		.	.	.	.																						.
Template SS confidence
						341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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