Job Description P0AEB2 Confidence 98.83% Date Thu Jan 5 11:22:55 GMT 2012 Rank 83 Aligned Residues 229 % Identity 17% Template c1mwuA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:penicillin-binding protein 2a; PDBTitle: structure of methicillin acyl-penicillin binding protein 2a2 from methicillin resistant staphylococcus aureus strain3 27r at 2.60 a resolution. Resolution 2.60 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																																	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	I	L	I	D	Y	N	S	G	K	V	L	A	E	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	V	R	R	D	P	A	S	L	T	K	M	M	T	S	Y	V	I	G	Q	A	M	K	A	G	K	F	K	E	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.									.	.	.
Template Conservation																																																												.									.	.	.
Template Sequence		S	G	T	A	I	H	P	Q	T	G	E	L	L	A	L	V	S	T	P	S	Y	D	V	Y	P	F	M	Y	G	M	S	N	E	E	Y	N	K	L	T	E	D	K	K	E	P	L	L	N	K	F	Q	I	T	T	S	P	G	T	.	Q	K	I	L	T	A	M	I	.	.	.	G	L	N	N	K	T	L	D	D	K
Template Known Secondary structure								T	T	T		B								S				S																			T	T		T	T	S		T	T	T	S		B					.									.	.	.					T	S			T	T
Template Predicted Secondary structure																																																												.									.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	T	I	G	N	D	A	W	A	T	G	N	P	V	F	K	G	S	S	L	M	F	L	K	P	G	M	Q	V	P	V	S	Q	L	I	R	G	I	N	L	Q	S	G	N	D	A	C	V	A	M	A	D	F	A	A	G	S	Q	D	A	F	V	G	L	M	N	S	Y	V	N	A	L	G	L	K	N	T	H
Query Conservation
Alig confidence																																						.	.	.	.																		.	.	.	.	.	.
Template Conservation																																						.	.	.	.																		.	.	.	.	.	.
Template Sequence		T	S	Y	K	I	D	G	K	G	W	Q	K	D	K	S	W	G	G	Y	N	V	T	R	Y	E	V	V	N	G	N	I	D	L	K	Q	A	.	.	.	.	I	E	S	S	D	N	I	F	F	A	R	V	A	L	E	L	G	.	.	.	.	.	.	S	K	K	F	E	K	G	M	K	K	L	G	V	G	E	D	I
Template Known Secondary structure								S	S				S	S	G	G	G	T	T						S	S												.	.	.	.			T	T														.	.	.	.	.	.												T	T	T	S
Template Predicted Secondary structure																																						.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.					.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.							.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
						176	.	.	.	180	.	.	.	.	.																.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		.	.	.	.	F	Q	T	V	H	G	L	D	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	Y	S	S	A	R	D	M	A	L	I	G	Q	A	L	I	R	D	.	.	.	.	V	P	N	E	Y	S	I	Y	K	E	K	E	F	T	F	N	G	I	R	Q	L	N	R	N	G	L	L	W
Query Conservation		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence		.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		P	S	D	Y	P	F	Y	N	A	Q	I	S	N	N	L	D	N	E	I	L	L	A	D	S	G	Y	G	Q	G	E	I	L	I	N	P	V	Q	I	L	S	I	Y	S	A	L	E	N	N	G	N	I	N	A	P	H	L	L	K	D	T	K	N	K	V	W	K	K	N	I	I	S	K	E	N	I	N	L	L	T	D
Template Known Secondary structure			S	S	S						B	S				T	T	S								T	T	T		S	S		B	B											G	G	G	T	T	T						B		B	S	S	S							S		S	S
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
																233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	S	L	N	V	D	G	I	K	T	G	H	T	D	K	A	G	Y	N	L	V	A	S	A	T	E	G	Q	M	R	L	I	S	A	V	M	.	.	.	.	.	G	G	R	T	F	K	G	R	E	A	E	S	K	K	L	L	T	W	G	F	R	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.													.	.	.	.	.
Template Conservation																																								.
Template Sequence		G	M	Q	Q	V	V	N	K	T	H	K	E	D	I	Y	R	S	Y	A	N	L	I	G	K	S	G	T	A	E	L	Q	I	G	W	F	I	S	Y	.	D	K	D	N	P	N	M	M	M	A	I	N	V	K	D	V	Q	D	K	G	M	A	S	Y	N	A	K	I	S	G	K	V	Y	D	E	L	Y	E	N
Template Known Secondary structure									T	T	T	T	T	T	T			T	T	S																				.		T	T	S		S											T	T	T	T	T																T	G	G
Template Predicted Secondary structure																																								.
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions