Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEP7
Confidence100.00%DateThu Jan 5 11:23:52 GMT 2012
Rank28Aligned Residues210
% Identity25%Templated2ez9a3
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAIS
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Template Sequence  KQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLA
Template Known Secondary structure 

SSB



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   366...370.........380.........390.........400.........410.........420.........430.........440.....
 
   445....450.........460.........470.........480.........490.........500.........510.........520....
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Query Sequence  GDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIR
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Template Sequence  GDGGASMTMQDLATQVQYHLPVINVVFTNCQYGWIKDEQEDTNQN. . . . . . . . . . DFIGVEFNDIDFSKIADGVHMQAFR
Template Known Secondary structure  GGGTT



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   446...450.........460.........470.........480.........490 .........500.........510.....
 
   525....530.........540.........550.........560.........570.........580.........590...
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Query Sequence  VFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSELDNVMEFEDIADNAADAPTETCFMHYE
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Template Sequence  VNKIEQLPDVFEQAKAI. . AQHEPVLIDAVITGDRPLPAEK. . . . . . . LRLDSAMSSAADIEAFKQRYE
Template Known Secondary structure 
BGGG..TTTS








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   516...520.........530.. .......540.........550.... .....560.........570.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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