Job Description P0AEP7 Confidence 96.36% Date Thu Jan 5 11:23:52 GMT 2012 Rank 107 Aligned Residues 163 % Identity 15% Template d2bfdb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.39

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																						.	.	.															.
Query SS confidence																						.	.	.															.
Query Sequence		V	D	A	A	M	Y	V	L	E	K	E	G	I	T	T	A	F	G	V	P	.	.	.	G	A	A	I	N	P	F	Y	S	A	M	R	K	H	.	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	M	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P	A	G	T	D
Query Conservation																						.	.	.															.
Alig confidence																						.	.	.															.																							.			.
Template Conservation																																																														.			.
Template Sequence		T	S	A	L	D	N	S	L	A	K	D	P	T	A	V	I	F	G	E	D	V	A	F	G	G	V	F	R	C	T	V	G	L	R	D	K	Y	G	K	D	R	V	F	N	T	P	L	C	E	Q	G	I	V	G	F	G	I	G	I	A	.	V	T	.	G	A	T	A	I	A	E	I	Q	F	A	D	Y	I	F	P
Template Known Secondary structure													T	T						T	T	T	T	T	T		T	T	S	T	T	T	T							T	T	T						S														.		T	.	T								S	S	G	G	G		G	G
Template Predicted Secondary structure																																																														.			.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																			.
Query SS confidence												.	.	.	.	.	.	.	.	.																																			.
Query Sequence		M	I	T	A	L	Y	S	A	S	A	.	.	.	.	.	.	.	.	.	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	.	S	K	M	A	V	T	V	R	E	A	A	L	V	P	R	V	L	Q	Q	A	F	H	L	M	R	S
Query Conservation												.	.	.	.	.	.	.	.	.																																			.
Alig confidence												.	.	.	.	.	.	.	.	.																			.																.																							.	.	.	.
Template Conservation																																							.																																							.	.	.	.
Template Sequence		A	F	D	Q	I	V	N	E	A	A	K	Y	R	Y	R	S	G	D	L	F	N	C	G	S	L	T	I	R	S	P	W	G	C	V	G	H	G	.	A	L	Y	H	S	Q	S	P	E	A	F	F	A	H	C	P	G	I	K	V	V	I	P	R	S	P	F	Q	A	K	G	L	L	L	S	C	I	E	.	.	.	.
Template Known Secondary structure		G						T	T	G	G	G					T	T	T	S	S			T	T								S			S	S		.	G	G	G	S	S									T	S	T	T							S	S														.	.	.	.
Template Predicted Secondary structure																																							.																																							.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	G	P	V	L	V	D	L	P	F	D	V	Q	V	A	E	I	E	F	D	P	D	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	K	N	P	C	I	F	F	E	P	K	I	L	Y	R	A	A	A	E	E	V	P	I	E
Template Known Secondary structure		.	S	S	S								G	G	G	T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions