Job Description P0AEP7 Confidence 99.70% Date Thu Jan 5 11:23:52 GMT 2012 Rank 62 Aligned Residues 154 % Identity 18% Template d1w85a_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 2.0

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.					.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.			.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																													.	.	.	.																				.	.
Query SS confidence																													.	.	.	.																				.	.
Query Sequence		K	D	R	H	W	I	N	C	G	Q	A	G	P	L	G	W	T	I	P	A	A	L	G	V	C	A	A	.	.	.	.	D	P	K	R	N	V	V	A	I	S	G	D	F	D	F	Q	F	L	I	.	.	E	E	L	A	V	G	A	Q	F	N	I	P	Y	I	H	V	L	V	N	N	A	Y	L	G	L	I	R	Q
Query Conservation																													.	.	.	.																				.	.
Alig confidence																													.	.	.	.																				.	.																					.						.	.
Template Conservation																																																																										.						.	.
Template Sequence		I	P	E	G	V	N	V	L	P	P	Q	I	I	I	G	A	Q	Y	I	Q	A	A	G	V	A	L	G	L	K	M	R	G	K	K	A	V	A	I	T	Y	T	G	D	G	G	T	S	Q	G	D	F	Y	E	G	I	N	F	A	G	A	F	K	A	P	A	I	F	V	V	Q	N	N	.	R	F	A	I	S	.	.
Template Known Secondary structure				T	T			B						S	T	T																T	T		S									T	G	G	G	G	S													T	T											.	S			T	T	.	.
Template Predicted Secondary structure																																																																										.						.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.			.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		S	Q	R	A	F	D	M	D	Y	C	V	Q	L	A	F	E	N	I	N	S	S	E	V	N	G	Y	G	V	D	H	V	K	V	A	E	G	L	G	C	K	A	I	R	V	.	.	F	K	P	E	D	I	A	P	A	F	E	Q	A	K	A	L	M	A	Q	Y	R	V	P	V	V	V	E	V	I	L	E	R	V	T
Query Conservation																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	V	E	K	Q	T	V	A	K	T	L	A	Q	K	A	V	A	A	G	I	P	G	I	Q	V	D	G	M	D	P	L	A	V	Y	A	A	V	K	A	A	R	E	R	A	I	N	G	E	G	P	T	L	I	E	T	L	C	F	R	Y	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T		S		S		S	G	G	G	G	G	G	T	T								T	T																		T	T	S												S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	S	M	G	S	E	L	D	N	V	M	E	F	E	D	I	A	D	N	A	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	H	T	M	S	G	D	S	K	E	L	E	N	E	W	A	K	K	D	P	L	V	R
Template Known Secondary structure			S		S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions