Job Description P0AEP7 Confidence 99.68% Date Thu Jan 5 11:23:52 GMT 2012 Rank 64 Aligned Residues 145 % Identity 17% Template d1umda_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.90

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		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.					.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.			.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																		.	.
Query SS confidence																						.	.	.	.																		.	.
Query Sequence		G	Q	A	G	P	L	G	W	T	I	P	A	A	L	G	V	C	A	A	D	.	.	.	.	P	K	R	N	V	V	A	I	S	G	D	F	D	F	Q	F	L	.	.	I	E	E	L	A	V	G	A	Q	F	N	I	P	Y	I	H	V	L	V	N	N	A	Y	L	G	L	I	R	Q	S	Q	R	A	F	D	M	D
Query Conservation																						.	.	.	.																		.	.
Alig confidence																						.	.	.	.																		.	.																							.											.	.	.	.
Template Conservation																																																																			.											.	.	.	.
Template Sequence		T	V	A	S	P	I	A	S	H	V	P	P	A	A	G	A	A	I	S	M	K	L	L	R	T	G	Q	V	A	V	C	T	F	G	D	G	A	T	S	E	G	D	W	Y	A	G	I	N	F	A	A	V	Q	G	A	P	A	V	F	I	A	E	N	N	F	.	Y	A	I	S	V	D	Y	R	H	Q	.	.	.	.
Template Known Secondary structure					S	S	T	T	T	T														T	T											T	G	G	G	G	S													T	T		S									S	.			T	T							.	.	.	.
Template Predicted Secondary structure																																																																			.											.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.			.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.							.	.	560	.
Predicted Secondary structure																																							.	.																																.	.	.	.	.	.
Query SS confidence																																							.	.																																.	.	.	.	.	.
Query Sequence		Y	C	V	Q	L	A	F	E	N	I	N	S	S	E	V	N	G	Y	G	V	D	H	V	K	V	A	E	G	L	G	C	K	A	I	R	V	F	.	.	K	P	E	D	I	A	P	A	F	E	Q	A	K	A	L	M	A	Q	Y	R	V	P	V	V	V	E	V	I	L	E	R	.	.	.	.	.	.	V	T	N	I
Query Conservation																																							.	.																																.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	S	P	T	I	A	D	K	A	H	A	F	G	I	P	G	Y	L	V	D	G	M	D	V	L	A	S	Y	Y	V	V	K	E	A	V	E	R	A	R	R	G	E	G	P	S	L	V	E	L	R	V	Y	R	Y	G	P	H	S	S	A	D	D	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S		S	G	G	G	G	G	G	T	T	S							T	T																		T	T														S		S	S	T	T			G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	G	S	E	L	D	N	V	M	E	F	E	D	I	A	D	N	A	A	D
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		S	R	Y	R	P	K	E	E	V	A	F	W	R	K	.	K	D	P	I	P	R
Template Known Secondary structure		G	G	T	S										T	.	T
Template Predicted Secondary structure																.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions