Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEP7
Confidence28.08%DateThu Jan 5 11:23:52 GMT 2012
Rank234Aligned Residues95
% Identity15%Templatec3tovB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycosyl transferase family 9; PDBTitle: the crystal structure of the glycosyl transferase family 9 from2 veillonella parvula dsm 2008
Resolution2.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  DAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITAL
Query Conservation 
 
   
   

  


 

     
  

     
  
    
  

  
 



 
 
  

   
 


  
    
Alig confidence 















.








































......















Template Conservation    
   
       

. 
   
                      

 

  

    ......
 
  


  





Template Sequence  AHVADYFGRLGYKTVF. FGGPXDLEXVQPVVEQXETKPIVATGKFQLGPLAAAXNRCN. . . . . . LLITNDSGPXHVGISQ
Template Known Secondary structure  TT
.


GGGT
SS


TT



S......SST
Template Predicted Secondary structure 


.
















......



Template SS confidence 















































































   204.....210......... 220.........230.........240.........250.........260 .........270......
 
   88.90.........100.........110.....
Predicted Secondary structure 













Query SS confidence 



























Query Sequence  YSASADSIPILCITGQAPRARLHKEDFQ
Query Conservation    
    







            
Alig confidence  ......





















Template Conservation  ......
 
 
 


 
 
    
    
Template Sequence  . . . . . . GVPIVALYGPSNPFFYGPYQAH
Template Known Secondary structure  ......T



SS
S

SSS
Template Predicted Secondary structure  ......













Template SS confidence 



























   277..280.........290........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions