 |
Job Description | P0AEP7 | Confidence | 25.87% | Date | Thu Jan 5 11:23:52 GMT 2012 |
Rank | 241 | Aligned Residues | 71 |
% Identity | 18% | Template | c3pg8B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; |
PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima
|
Resolution | 2.00 Å |
|
 |
  |   |
189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | M | Q | I | E | K | A | V | E | M | L | I | Q | A | E | R | P | V | I | V | A | G | G | G | V | I | N | A | D | A | A | A | L | L | Q | Q | F | A | E | L | T | S | V | P | V | I | P | T | L | M | G | W | G | C | I | P | D | D | H | E | L | M | A | G | M | V | G | L | Q | T | A | H | R | Y | G | N | A | T | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|
|   |   |   |
Template Sequence |   |
G | R | E | M | L | M | E | T | A | H | F | L | S | E | L | G | V | K | V | L | R | G | G | A | Y | K | L | G | E | K | G | L | E | Y | L | R | E | A | A | D | K | Y | G | M | Y | V | V | T | E | A | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | E | D | D | L | P | K | V | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 160 | . | . | . | . | . |
  |
  |   |
269 | 270 | . | . | . | . | . | . | . | . | . | 280 |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | S | D | M | V | F | G | I | G | N | R |
Query Conservation |   |
  |   |   |
|   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
| . |   |
|
|
|
|
|   |
Template Sequence |   |
E | Y | A | D | . |
I | I | Q | I | G | A | R |
Template Known Secondary structure |   |
 |  |
| S | . |  |  |  |  |
| G | G |
Template Predicted Secondary structure |   |
 |
|
|
| . |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | |
180 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|