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Job DescriptionP0AEP7
Confidence100.00%DateThu Jan 5 11:23:52 GMT 2012
Rank23Aligned Residues497
% Identity16%Templatec3lq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- PDBTitle: crystal structure of 2-succinyl-6-hydroxy-2,4-cyclohexadiene2 1-carboxylic acid synthase/2-oxoglutarate decarboxylase3 from listeria monocytogenes str. 4b f2365
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  MRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDM
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Template Sequence  TDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAKAS. KRPVVLLCTSGTAAANY
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TTT
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   910.........20.........30.........40.........50.........60.........70 .........80.......
 
   84.....90.........100.........110.........120.........130.........140.... .....150......
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Query Sequence  ITALYSASADSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQ. . . . . . . QAFHLMRSGRPG
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Template Sequence  FPAVAEANLSQIPLIVLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRG
Template Known Secondary structure  TT



GGGTTSS
TT



TTTTGGGSS





SSSS

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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  PVLVDLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIP
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Template Sequence  PVHLNFPLREPLVPILEPSPF. . . . YYTHEVLDDSSIQKMVTEC. TGKKGVFVVG. PIDKKELEQPMVDLAKKLGWPILA
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   168.170.........180........ .190.........200....... ..210....... ..220.........230.........240.
 
   237. .240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  TL. MGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPD
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Template Sequence  DPLSGLRSYGALDEVVIDQYDA. FLKEAEIIDKLTPEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVT
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GGGSTTSBSS

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   254.....260.........270..... ....280.........290.........300.........310.........320.........330..
 
   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  LGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGL
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Template Sequence  DMIHCDERFLLDIMQQNMPDD. . AKDAAWLNGWTSYNKVAREIVLA. . . . . EMANEEGKIVAELRRLLPDKAGLFIGNSM
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   333......340.........350... ......360.........370...... ...380.........390.........400.....
 
   396. ..400.........410.........420.........430.........440.........450.........460.........470....
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Query Sequence  SQ. IAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNA
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Template Sequence  PIRDVDTYFSQIDKKIKMLANRGANGIDGVVSSALGASV. . VFQPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNND
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SSSTT..TSSSTGGGGTT




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   410.........420.........430.........440........ .450.........460.........470.........480.......
 
   475....480.........490.........500.........510.........520.........530.........540.........550....
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Query Sequence  YLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVI
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Template Sequence  EL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DFRFAAAFYDADYHEAKSVDELEEAIDKAS. . . . YHKGLDIIEVK
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TTT


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   513. .....520.........530.........540.... .....550.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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