Job Description P0AEP7 Confidence 100.00% Date Thu Jan 5 11:23:52 GMT 2012 Rank 9 Aligned Residues 520 % Identity 25% Template c3eyaE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome]; PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	M	R	A	V	D	A	A	M	Y	V	L	E	K	E	G	I	T	T	A	F	G	V	P	G	A	A	I	N	P	F	Y	S	A	M	R	K	H	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	M	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P	A	G
Query Conservation
Alig confidence				.																																																															.
Template Conservation				.																																																															.
Template Sequence		M	K	.	Q	T	V	A	A	Y	I	A	K	T	L	E	S	A	G	V	K	R	I	W	G	V	T	G	D	S	L	N	G	L	S	D	S	L	N	R	M	G	T	I	E	W	M	S	T	R	H	E	E	V	A	A	F	A	A	G	A	E	A	Q	L	S	.	G	E	L	A	V	C	A	G	S	C	G	P	G	N
Template Known Secondary structure				.		B												T	T										G	G	G												S	S						S	S																.	S	S								T	T
Template Predicted Secondary structure				.																																																															.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	M	I	T	A	L	Y	S	A	S	A	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	S	K	M	A	V	T	V	R	E	A	A	L	V	P	R	V	L	Q	Q	A	F	H	L	M	R	S	G	R	P	G	P	V	L	V
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		L	H	L	I	N	G	L	F	D	C	H	R	N	H	V	P	V	L	A	I	A	A	H	I	P	S	S	E	I	G	S	G	Y	F	Q	E	T	H	P	Q	E	L	F	R	E	C	S	H	Y	C	E	L	V	S	S	P	E	Q	I	P	Q	V	L	A	I	A	M	R	K	A	V	L	N	R	.	G	V	S	V	V
Template Known Secondary structure			T	T										T	T										S		G	G	G	T	T	S			T	T								T	S	T	T		S							S	G	G	G															T	T	.	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		D	L	P	F	D	V	Q	V	A	E	I	E	F	D	.	P	D	M	Y	E	P	L	P	V	Y	K	P	A	A	S	R	M	Q	I	E	K	A	V	E	M	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S	V	P	V	I	P	T	L	M
Query Conservation																.
Alig confidence																.																																										.	.
Template Conservation																																																										.	.
Template Sequence		V	L	P	G	D	V	A	L	K	P	A	P	E	G	A	T	M	H	W	Y	H	A	P	Q	P	V	V	T	P	E	E	E	E	L	R	K	L	A	Q	L	L	R	Y	S	S	N	I	A	L	M	C	G	S	G	C	A	.	.	G	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A	L	R
Template Known Secondary structure									T	S	B			T	T																													T			S							G	G	G	T	.	.	T													T							G	G
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	G	C	I	P	D	D	H	E	L	M	A	G	M	V	G	L	Q	T	A	H	R	Y	G	N	A	T	L	L	A	S	D	M	V	F	G	I	G	N	R	F	A	N	R	H	T	G	S	V	E	K	Y	T	E	G	R	K	I	V	H	I	D	I	E	P	T	Q	I	G	R	V	L	C	P	D	L	G	I	V
Query Conservation
Alig confidence																				.																													.	.	.	.	.
Template Conservation																				.																													.	.	.	.	.
Template Sequence		G	K	E	H	V	E	Y	D	N	P	Y	D	V	G	M	T	G	L	.	I	G	F	S	S	G	F	H	T	M	M	N	A	D	T	L	V	L	L	G	T	Q	F	P	Y	R	A	F	.	.	.	.	.	Y	P	T	D	A	K	I	I	Q	I	D	I	N	P	A	S	I	G	A	H	S	K	V	D	M	A	L	V
Template Known Secondary structure		G					S	S	S		T	T	B					S	T	.	T	S												S						S						G	G	G	.	.	.	.	.	S		S	S	S							S		G	G	G	T	T	S	S	S			S
Template Predicted Secondary structure																				.																													.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	K	A	A	L	T	L	L	V	E	V	A	Q	E	M	Q	K	A	G	R	L	P	C	R	K	E	W	V	A	D	C	Q	Q	R	K	R	T	L	L	R	K	T	H	F	D	N	V	P	V	K	P	Q	R	V	Y	E	E	M	N	K	A	F	G	R	D	V	C	Y	V	T	T	I	G	L	S	Q	I	A
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		G	D	I	K	S	T	L	R	A	L	L	P	L	V	E	E	.	.	.	K	A	D	R	K	F	L	D	K	A	L	E	D	Y	R	D	A	R	K	G	L	D	D	L	A	K	P	S	E	K	A	I	H	P	Q	Y	L	A	Q	Q	I	S	H	F	A	A	D	D	A	I	F	T	C	D	V	G	T	P	T	V	W
Template Known Secondary structure												G	G	G	S			.	.	.																									S				S	S		B													S		T	T							T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Q	M	L	H	V	F	K	D	R	H	W	I	N	C	G	Q	A	G	P	L	G	W	T	I	P	A	A	L	G	V	C	A	A	D	P	K	R	N	V	V	A	I	S	G	D	F	D	F	Q	F	L	I	E	E	L	A	V	G	A	Q	F	N	I	P	Y	I	H	V	L	V	N	N	A	Y	L	G	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	R	Y	L	K	M	N	G	K	R	R	L	L	G	S	F	N	H	G	S	M	A	N	A	M	P	Q	A	L	G	A	Q	A	T	E	P	E	R	Q	V	V	A	M	C	G	D	G	G	F	S	M	L	M	G	D	F	L	S	V	V	Q	M	K	L	P	V	K	I	V	V	F	N	N	S	V	L	G	G	T
Template Known Secondary structure										S	S							T	T	T			T	T													S	T	T	S														T	G	G	G							T	T											S	B
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	S	Q	R	A	F	D	M	D	Y	C	V	Q	L	A	F	E	N	I	N	S	S	E	V	N	G	Y	G	V	D	H	V	K	V	A	E	G	L	G	C	K	A	I	R	V	F	K	P	E	D	I	A	P	A	F	E	Q	A	K	A	L	M	A	Q	Y	R	V	P	V	V	V	E	V	I	L	E	R	V	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	H	D	T	N	F	A	R	I	A	E	A	C	G	I	T	G	I	R	V	E	K	A	S	E	V	D	E	A	L	Q	R	A	F	.	.	.	.	S	I	D	G	P	V	L	V	D	V	V	V	A	K	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B													T	T	S							S	G	G	G										.	.	.	.		S	S	S								B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
																											481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.					.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	S	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	I	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		532	.	.	.