Job Description P0AEP7 Confidence 97.30% Date Thu Jan 5 11:23:52 GMT 2012 Rank 100 Aligned Residues 211 % Identity 16% Template c3dufD_ PDB info PDB header:oxidoreductase/transferase Chain: D: PDB Molecule:pyruvate dehydrogenase e1 component subunit beta; PDBTitle: snapshots of catalysis in the e1 subunit of the pyruvate2 dehydrogenase multi-enzyme complex Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																						.	.			.	.	.	.	.	.																		.
Query SS confidence																						.	.			.	.	.	.	.	.																		.
Query Sequence		A	K	M	R	A	V	D	A	A	M	Y	V	L	E	K	E	G	I	T	T	.	.	A	F	.	.	.	.	.	.	G	V	P	G	A	A	I	N	P	F	Y	S	A	M	R	K	H	.	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	M	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C
Query Conservation																						.	.			.	.	.	.	.	.																		.
Alig confidence																						.	.			.	.	.	.	.	.																		.																								.		.
Template Conservation																																																																									.		.
Template Sequence		A	Q	M	T	M	V	Q	A	I	T	D	A	L	R	I	E	L	K	N	D	P	N	V	L	I	F	G	E	D	V	G	V	N	G	G	V	F	R	A	T	E	G	L	Q	A	E	F	G	E	D	R	V	F	D	T	P	L	A	E	S	G	I	G	G	L	A	I	G	L	A	L	.	Q	.	G	F	R	P	V	P
Template Known Secondary structure																						T	T						T	T		S	T	T			T	T	S	T	T	T	T							T	T	T						S															.	T	.	T
Template Predicted Secondary structure																																																																									.		.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.		.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.										.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																						.	.	.	.	.	.	.	.	.																																			.
Query Sequence		L	G	T	S	G	P	A	G	T	D	M	I	T	A	L	Y	S	A	S	A	.	.	.	.	.	.	.	.	.	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	.	S	K	M	A	V	T	V	R	E	A	A	L	V	P	R	V
Query Conservation																						.	.	.	.	.	.	.	.	.																																			.
Alig confidence																						.	.	.	.	.	.	.	.	.														.	.																				.
Template Conservation																																												.	.
Template Sequence		E	I	Q	F	F	G	F	V	Y	E	V	M	D	S	I	C	G	Q	M	A	R	I	R	Y	R	T	G	G	R	Y	H	M	P	I	T	I	R	S	P	F	G	G	.	.	G	V	H	T	P	E	L	H	S	D	S	L	E	G	L	V	A	Q	Q	P	G	L	K	V	V	I	P	S	T	P	Y	D	A	K	G	L
Template Known Secondary structure				S	S	G	G	G	G	G	G	G							T	T	T	T					T	T	T	S	S													.	.	S	S				T	T	S	S								T	T	S	T	T								S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	A	F	H	L	M	R	S	G	R	P	G	P	V	L	V	D	L	P	F	D	V	Q	V	A	E	I	E	F	D	P	D	M	Y	E	P	L	P	V	Y	K	P	A	A	S	R	M	Q	I	E	K	A	V	E	M	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L
Query Conservation
Alig confidence								.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	S	A	I	R	.	.	.	.	.	D	N	D	P	V	I	F	L	E	H	L	K	L	Y	R	S	F	R	Q	E	V	P	E	G	E	Y	T	I	P	I	G	K	A	.	.	.	.	.	.	.	.	.	.	.	.	D	I	K	R	E	G	K	D	I	T	I	I	A	Y	G	A	M	V	H	E	S	L	K	A
Template Known Secondary structure								.	.	.	.	.	S	S	S								T	T	T	T	T	S							S	S						T	T			.	.	.	.	.	.	.	.	.	.	.	.							S	S							T	T
Template Predicted Secondary structure								.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.													.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	F	A	E	L	T	S	V	P	V
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		A	A	E	L	E	K	E	.	G	I	S	A
Template Known Secondary structure							T	T	.	T
Template Predicted Secondary structure									.
Template SS confidence
		220	.	.	.	.	.	.		.	.	.	230

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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