Job Description P0AEP7 Confidence 85.54% Date Thu Jan 5 11:23:52 GMT 2012 Rank 138 Aligned Residues 72 % Identity 14% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	E	K	A	V	E	M	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S	V	P	V	I	P	T	L	M	G	W	G	C	I	P	D	D	H	E	L	M	A	G	M	V	G	L	Q	T	A	H	R	Y	G	N	A	T	L	L	A	S
Query Conservation
Alig confidence																																																		.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		T	A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	E	T	.	.	.	.	.	R	T	K	S	P	V	D	I	.	.	.	.	.	.	.	.	V	K	E	G	M	E	K	F	K	K	A
Template Known Secondary structure																							S				T	T	G	G	G	S	S							S	S							S	S	.	.	.	.	.	S			S	S	S	T	T	.	.	.	.	.	.	.	.							T	T	S	S
Template Predicted Secondary structure																																																		.	.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.									.	.	.	.	.	.	.	.	180	.	.
		272	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L	I	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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