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Job DescriptionP0AEP7
Confidence100.00%DateThu Jan 5 11:23:52 GMT 2012
Rank10Aligned Residues537
% Identity24%Templatec2q27B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAG
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Template Sequence  LQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQA. EGIRYIGFRHEQSAGYAAAASGFLT. QKPGICLTVSAPGF
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TT




TTT.TT

SS.SS

S
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   5....10.........20.........30.........40... ......50.........60........ .70.........80..
 
   81........90.........100........ .110.........120.........130.........140.........150........
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Query Sequence  TDMITALYSASADSIPILCITGQAPRAR. . LHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPV
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Template Sequence  LNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGV
Template Known Secondary structure  T



TTS

TT


GGGSS

SGGGSSS

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   159160.........170.... .....180.........190.........200.........210.........220.........230....
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Query Sequence  LVDLPFDVQVAEIEFD. . . . PDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPV
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Template Sequence  YLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPF
Template Known Secondary structure 
TT



SSSS





T
SS
T
TT

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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  IPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCP
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Template Sequence  LPMSMAKGILEDTHPLSAAAAR. . . . . . . . SFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPI
Template Known Secondary structure 
GGGTTSS
TT
TTB
GGG........
SS


SGGGGGGTTTS
TT
S
GGGTTSSS

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   243......250.........260.... .....270.........280.........290.........300.........310....
 
   315....320.........330.........340.........350.........360.........370.........380...... ...390..
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Query Sequence  DLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRD. . VCYVTT
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Template Sequence  AVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNE
Template Known Secondary structure  SS
T







SSB
T
TT
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   393......400.........410.........420.........430.........440.........450.........460.........470..
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Query Sequence  IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVN
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Template Sequence  GANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT. SGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFN
Template Known Secondary structure  SSS


SSS
STTTT
TT
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TTTGGGT

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   395....400.........410.........420.........430...... ...440.........450.........460.........470...
 
   473......480.........490.........500.........510.........520.........530.........540.........550..
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Query Sequence  NAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVE
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Template Sequence  NGGIYRGDGVDLSGAGA. . . . . . . . . . PSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGI. . . . QSRKPTIIN
Template Known Secondary structure 
SBSS
S



TTSS

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TTB

TT

GGGGGGGGT

S....TS
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   474.....480.........490 .........500.........510.........520.........530 .........
 
   553......560..
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Query Sequence  VILERVTNIS
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Template Sequence  VVIDPAAGTE
Template Known Secondary structure  B
TTS


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   540.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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