Job Description P0AEP7 Confidence 90.45% Date Thu Jan 5 11:23:52 GMT 2012 Rank 130 Aligned Residues 73 % Identity 10% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	E	K	A	V	E	M	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S	V	P	V	I	P	T	L	M	G	W	G	C	I	P	D	D	H	E	L	M	A	G	M	V	G	L	Q	T	A	H	R	Y	G	N	A	T	L	L	A	S
Query Conservation
Alig confidence																																																		.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		T	C	S	K	L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C	A	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	G	S	Y	T	.	.	.	.	.	.	E	M	D	P	V	I	I	.	.	.	.	.	.	A	S	E	G	V	E	K	F	K	N	E	N	F
Template Known Secondary structure													T	T											S	S	S														T									.	.	.	.	.	.		S						.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.
		272	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	I	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions