Job Description P0AEP7 Confidence 82.17% Date Thu Jan 5 11:23:52 GMT 2012 Rank 141 Aligned Residues 73 % Identity 19% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		192	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		Q	I	E	K	A	V	E	M	L	I	Q	A	.	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S	V	P	V	I	P	T	L	M	G	W	G	C	I	P	D	D	H	E	L	M	A	G	M	V	G	L	Q	T	A	H	R	Y	G	N	A	T	L	L	A
Query Conservation														.
Alig confidence														.																																		.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.											.	.	.	.	.	.
Template Sequence		S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	.	.	.	.	.	.	S	D	V	G	Q	K	P	V	D	I	.	.	.	.	.	.	V	N	A	A	L	K	E	A	K	L	K	F
Template Known Secondary structure		T										T	S	S	S					B						S	S	S		S											T	T						.	.	.	.	.	.		S	S				T	T			.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.											.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.
		271	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	M	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	V	L	L	V
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions