Job Description P0AEP7 Confidence 39.26% Date Thu Jan 5 11:23:52 GMT 2012 Rank 213 Aligned Residues 197 % Identity 12% Template c2csuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		M	A	K	M	R	A	V	D	A	A	M	Y	V	L	E	K	E	G	.	.	I	T	T	A	F	G	V	P	G	A	A	I	N	P	F	Y	S	A	M	R	K	H	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	M	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P
Query Conservation																				.	.
Alig confidence																				.	.												.	.	.																																									.	.
Template Conservation																																	.	.	.																																									.	.
Template Sequence		I	E	G	V	R	N	G	K	K	F	X	E	V	A	K	R	V	T	K	K	K	P	I	I	A	L	K	A	G	K	K	.	.	.	I	Y	E	A	A	F	K	Q	S	G	V	L	V	A	N	T	I	D	E	X	L	S	X	A	R	A	F	S	Q	P	L	P	R	G	N	K	V	A	I	X	.	.	T	N	A	G
Template Known Secondary structure			S			S													T	T	T	S											.	.	.										T					S	S										G	G	G	S				S	S							.	.		S
Template Predicted Secondary structure																																	.	.	.																																									.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		A	G	T	D	M	I	T	A	L	Y	S	A	S	A	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	S	K	M	A	V	T	V	R	E	A	A	L	V	.	.	.	.	.	P	R	V	L	Q	Q	A	F	H	L	M	R	S	G
Query Conservation																																																															.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	G	V	L	T	A	D	E	L	D	K	R	G	L	K	L	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	K	T	I	E	E	L	R	S	F	L	P	P	X	A	A	V	K	N	P	V	D	X	I	A	S	A	R	G	E	D	Y	Y	R	T	A	K	L	L	L	Q	D
Template Known Secondary structure												T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S		T	T				S	S						T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.																		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		R	P	G	P	V	L	V	D	L	P	F	D	V	Q	V	A	E	I	E	F	D	P	D	M	Y	E	P	L	P	V	Y	K	P	A	A	S	R	M	Q	I	E	K	A	V	E	M	L	I	Q	A	.	.	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S
Query Conservation																																																				.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.											.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		P	N	V	D	X	L	I	A	I	C	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	F	A	G	X	T	L	T	E	H	A	E	G	I	I	R	A	V	K	E	V	N	N	E	K	P	V	L	A	X	F	X	A	.	.	.	G	Y	V	S	E	K	A	K	E	L	L	E	K	N	G
Template Known Secondary structure		T	T		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T			S	S																										.	.	.														T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.																	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.				.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		232	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	V	I	P	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	T	Y	E	R	P
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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