Job Description P0AEP7 Confidence 96.61% Date Thu Jan 5 11:23:52 GMT 2012 Rank 104 Aligned Residues 206 % Identity 18% Template c1um9D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:2-oxo acid dehydrogenase beta subunit; PDBTitle: branched-chain 2-oxo acid dehydrogenase (e1) from thermus2 thermophilus hb8 in apo-form Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																				.	.	.	.																									.
Query SS confidence																				.	.	.	.																									.
Query Sequence		V	D	A	A	M	Y	V	L	E	K	E	G	I	T	T	A	F	G	.	.	.	.	V	P	G	A	A	I	N	P	F	Y	S	A	M	R	K	H	G	G	I	R	H	I	L	A	.	R	H	V	E	G	A	S	H	M	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P	A	G	T
Query Conservation																				.	.	.	.																									.
Alig confidence																				.	.	.	.																									.																.		.
Template Conservation																																																																.		.
Template Sequence		N	R	A	L	D	E	E	M	A	K	D	P	R	V	V	V	L	G	E	D	V	G	K	R	G	G	V	F	L	V	T	E	G	L	L	Q	K	Y	G	P	D	R	V	M	D	T	P	L	S	E	A	A	I	V	G	A	A	L	G	M	A	A	.	H	.	G	L	R	P	V	A	E	I	Q	F	A	D	Y	I	F
Template Known Secondary structure													T	T						T	T		S	S	S			T	T	S	T	T	T	T							T	T	T						S															.		.	T								S		G	G	G	G	G
Template Predicted Secondary structure																																																																.		.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																				.
Query SS confidence												.	.	.	.	.	.	.	.	.																																				.
Query Sequence		D	M	I	T	A	L	Y	S	A	S	.	.	.	.	.	.	.	.	.	A	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	.	S	K	M	A	V	T	V	R	E	A	A	L	V	P	R	V	L	Q	Q	A	F	H	L	M	R
Query Conservation												.	.	.	.	.	.	.	.	.																																				.
Alig confidence												.	.	.	.	.	.	.	.	.															.	.																				.																							.	.	.
Template Conservation																																			.	.																																											.	.	.
Template Sequence		P	G	F	D	Q	L	V	S	Q	V	A	K	L	R	Y	R	S	G	G	Q	F	T	A	P	L	V	V	R	M	P	S	G	G	.	.	G	V	R	G	G	H	H	H	S	Q	S	P	E	A	H	F	V	H	T	A	G	L	K	V	V	A	V	S	T	P	Y	D	A	K	G	L	L	K	A	A	I	R	.	.	.
Template Known Secondary structure		G	G							T	T	T	T					T	T	T	S	S													.	.	S	S				S	S	S	S									T	S	T	T								S														.	.	.
Template Predicted Secondary structure																																			.	.																																											.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	P	G	P	V	L	V	D	L	P	F	D	V	Q	V	A	E	I	E	F	D	P	D	M	Y	E	P	L	P	V	Y	K	P	A	A	S	R	M	Q	I	E	K	A	V	E	M	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S
Query Conservation
Alig confidence		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		.	.	D	E	D	P	V	V	F	L	E	P	K	R	L	Y	R	S	V	K	E	E	V	P	E	E	D	Y	T	L	P	I	G	K	A	.	.	.	.	.	.	.	.	.	.	.	.	A	L	R	R	E	G	K	D	L	T	L	I	C	Y	G	T	V	M	P	E	V	L	Q	A	A	A	E	L	.	A	K	A	G
Template Known Secondary structure		.	.		S	S								G	G	G	S	S	S							S	S						T	T			.	.	.	.	.	.	.	.	.	.	.	.							S	S							G	G	G												.			T	T
Template Predicted Secondary structure		.	.																																		.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.													.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.
		232	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		229	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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