Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEP7
Confidence100.00%DateThu Jan 5 11:23:52 GMT 2012
Rank6Aligned Residues530
% Identity31%Templatec1t9dB_
PDB info PDB header:transferaseChain: B: PDB Molecule:acetolactate synthase, mitochondrial; PDBTitle: crystal structure of yeast acetohydroxyacid synthase in2 complex with a sulfonylurea herbicide, metsulfuron methyl
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAG
Query Conservation 
  
 


 
   
   

  


 

     
  

     
  
    
  

  
 



 
 
  

   
 


 
Alig confidence 
































































.













Template Conservation      


  
   
   

  


 

     
  

     
  
    
  
   
 
 

 
.
   

  
 
 
 
Template Sequence  FVGLTGGQIFNEMMSRQNVDTVFGYPGGAILPVYDAIHNSDKFNFVLPKHEQGAGHMAEGYARAS. GKPGVVLVTSGPGA
Template Known Secondary structure  STT
BTT




GGGTTT
SSS

SS.SS

ST
Template Predicted Secondary structure 




















.




Template SS confidence 















































































   8990.........100.........110.........120.........130.........140.........150... ......160.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  TDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
Query Conservation   
    
  
    







            
  
         
    
         
  
   
     


 
Alig confidence 















































































Template Conservation   
    
  
     




 
  
    
    
  
   
    
               
  
   
     


 
Template Sequence  TNVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQEADVVGISRSCTKWNVMVKSVEELPLRINEAFEIATSGRPGPVLV
Template Known Secondary structure  TTT



TTTTTS

TT


TGGGSS


GGGSSS

Template Predicted Secondary structure 

























Template SS confidence 















































































   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   161........170.........180.........190.........200.........210.... .....220.........230.........
Predicted Secondary structure 































.





Query SS confidence 





















































.
























Query Sequence  DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGV. INADAAALLQQFAELTSVPVIPTLM
Query Conservation   

 
                                  
  
 




 
 
 .    
   
  


 
  

  
  
Alig confidence 












...........





























.
























Template Conservation   

 

       ...........               
  
 




 
 
      
   
  


    

  
  
Template Sequence  DLPKDVTAAILRN. . . . . . . . . . . PIPFVMQSINKAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQ
Template Known Secondary structure  SB

S...........




SS
GGGGGSTTTT


GG
Template Predicted Secondary structure 








...........


















Template SS confidence 















































































   248.250.........260 .........270.........280.........290.........300.........310......
 
   240.........250.........260.........270.........280.........290.. .......300.........310
Predicted Secondary structure 



































.........








Query SS confidence 




















































. . . . . . . . .

















Query Sequence  GWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKY. . . . . . . . . TEGRKIVHIDIEPTQIGR
Query Conservation    
  
       
  
           
   
 

 

              .........      
 

 
      
Alig confidence 

















.

































.........

















Template Conservation   

     

   
  
 .     
   
  

 

 

  
                          
 
         
Template Sequence  GLGSFDQEDPKSLDMLGM. HGCATANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINK
Template Known Secondary structure  GTTSS
TTSTT
ST.TS

SS



TTTSSSGGGS
TTS
S
GGGTTS
Template Predicted Secondary structure 
















.






































Template SS confidence 















































































   337..340.........350.... .....360.........370.........380.........390.........400.........410.....
 
   311........320.........330.........340.........350......... 360.........370.........380... ..
Predicted Secondary structure 













..












...

Query SS confidence 
















































. .























. . .

Query Sequence  VLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTL. . LRKTHFDNVPVKPQRVYEEMNKAF. . . GR
Query Conservation         
  
    
  
                              ..                   
   
...  
Alig confidence 




























......













..























...

Template Conservation         
  
    
  
   
      ......                            
      
         
Template Sequence  VVQTQIAVEGDATTNLGKMMSKIFPVKER. . . . . . SEWFAQINKWKKEYPYAYMEETPGSKIKPQTVIKKLSKVANDTGR
Template Known Secondary structure  SS

SS
GGGS





......S







TT

B
TT
S
Template Predicted Secondary structure 












......













Template SS confidence 















































































   416...420.........430.........440.... .....450.........460.........470.........480.........
 
   386...390.........400.........410.........420.........430.........440.........450.........460.....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  DVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIP
Query Conservation    

  
 
              
         
 

  
  


 


     

 
 




     

 

    

Alig confidence 















































































Template Conservation    

  
 
                          

     


 


   
 

   




      
 

    
 
Template Sequence  HVIVTTGVGQHQMWAAQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVAKPESLVIDIDGDASFNMTLTELSSAVQAGTP
Template Known Secondary structure 

SSS


STT



SS

TT

TTSGGGT

Template Predicted Secondary structure 

































Template SS confidence 















































































   490.........500.........510.........520.........530.........540.........550.........560.........
 
   466...470.........480.........490.........500.........510.........520.........530.........540.....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  YIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQY
Query Conservation 
 


 

   
                                
   

 
 
     
    

  

  
       
Alig confidence 























..........







































....

Template Conservation 
 


 

                ..........          
   

 
 
     
    

  

  
 ....  
Template Sequence  VKILILNNEEQGMVTQWQSLFYEH. . . . . . . . . . RYSHTHQLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFV. . . . ST
Template Known Secondary structure 

SS
STT..........


S






TS
S....
Template Predicted Secondary structure 












..........
















....
Template SS confidence 















































































   570.........580.........590... ......600.........610.........620.........630... ..
 
   546...550.........560...
Predicted Secondary structure 











Query SS confidence 

















Query Sequence  RVPVVVEVILERVTNISM
Query Conservation    
 



 

       
Alig confidence 

















Template Conservation   

 



 

      
Template Sequence  KGPVLLEVEVDKKVPVLP
Template Known Secondary structure  SS
B
SS


SS
Template Predicted Secondary structure 











Template SS confidence 

















   636...640.........650...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions