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Job DescriptionP0AEP7
Confidence100.00%DateThu Jan 5 11:23:52 GMT 2012
Rank7Aligned Residues532
% Identity25%Templatec1ozhD_
PDB info PDB header:lyaseChain: D: PDB Molecule:acetolactate synthase, catabolic; PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  MRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDM
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Template Sequence  AHGADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLD. SSIRIIPVRHEANAAFMAAAVGRIT. GKAGVALVTSGPGCSNL
Template Known Secondary structure  S
TT




GGGT.SSS
SS.SS

STTT
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   11........20.........30.........40...... ...50.........60.........70. ........80........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  ITALYSASADSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLP
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Template Sequence  ITGMATANSEGDPVVALGGAVK. . . . . . RADKSMDTVAMFSPVTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLP
Template Known Secondary structure  T



......GGG



GGG
S


GGGSSS

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   8990.........100.........110 .........120.........130.........140.........150.........160..
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  FDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMGWGC
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Template Sequence  QDVVDGPVSGKVLPASG. APQMGAAPDDAIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQAAGA
Template Known Secondary structure  S







.S






T
SS
GGGGSGGG



GGGTTT
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   169170.........180..... ....190.........200.........210.........220.........230.........240.......
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  IPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAK
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Template Sequence  VNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMWNS. . GNATLVHIDVLPAYEERNYTPDVELVGDIA
Template Known Secondary structure  S
GGG
TT
SSBTT

SS

GGGS
GGGT

..S
SSS



BTTB

SS
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   248.250.........260.........270.........280.........290..... ....300.........310.........320.....
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  AALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQM
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Template Sequence  GTLNKLAQNIDHRLVL. . . . . . SPQAAEILRDRQHQRELLDLNQFALHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIARY
Template Known Secondary structure  T

S



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SSB


TT

SST
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   326...330.........340. ........350.........360.........370.........380.........390.........
 
   404.....410.........420.........430.........440.........450.........460.........470.........480...
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Query Sequence  LHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQ
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Template Sequence  LYTFRARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSVSGDGGFLQSSMELETAVRLKANVLHLIWVDNGYNMVAIQE
Template Known Secondary structure  GGG


S


TT

TT
STTS
TTT


SB
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   405....410.........420.........430.........440.........450.........460.........470.........480....
 
   484.....490.........500.........510.........520.........530.........540.........550.........560...
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Query Sequence  RAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISM
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Template Sequence  EKKYQ. . . . . . . . . . . RLSGVEFGPMDFKAYAESFGAKGFAVESAEALEPTLRAAM. . . . DVDGPAVVAIPVDYRDNPLL
Template Known Secondary structure  S...........S

S
B




TTTS

STTT....
SS
B

TT
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   485.... 490.........500.........510.........520......... 530.........540.........
 
   564...
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Query Sequence  GSEL
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Template Conservation      
Template Sequence  MGQL
Template Known Secondary structure  TTB
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   550...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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