Job Description P0AEP7 Confidence 94.49% Date Thu Jan 5 11:23:52 GMT 2012 Rank 126 Aligned Residues 193 % Identity 20% Template c1ik6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate dehydrogenase; PDBTitle: 3d structure of the e1beta subunit of pyruvate2 dehydrogenase from the archeon pyrobaculum aerophilum Resolution 2.00 Å

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		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		M	A	K	M	R	A	V	.	.	D	A	A	M	Y	V	L	E	K	E	G	I	T	T	A	F	G	V	P	G	A	A	I	N	P	F	Y	S	A	M	R	K	H	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	M	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P
Query Conservation									.	.
Alig confidence									.	.											.	.																			.	.																										.								.	.
Template Conservation																					.	.																			.	.																										.								.	.
Template Sequence		M	A	N	M	A	K	A	I	N	M	A	L	H	E	E	M	E	R	D	.	.	E	R	V	V	V	L	G	E	L	V	T	E	G	L	Y	E	R	F	.	.	G	P	E	R	V	I	D	T	P	L	N	E	G	G	I	L	G	F	A	M	G	M	A	M	A	.	G	L	K	P	V	A	E	.	.	I	Q	F	V
Template Known Secondary structure																					.	.	T	T								T	T	T	T						.	.		T	T	T						S															T	.	T							.	.
Template Predicted Secondary structure																					.	.																			.	.																										.								.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.			.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		A	G	T	D	M	I	T	A	L	Y	S	A	S	A	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	.	S	K	M	A	V	T	V	R	E	A	A	L	V	P	R	V	L	Q	Q	A	F	H	L	M	R	S	G	R	P	G	P
Query Conservation																																																		.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.							.																								.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template Sequence		L	G	A	D	E	L	L	N	H	I	A	K	L	R	Y	K	A	P	L	V	V	R	T	P	V	G	S	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	F	V	H	T	P	G	L	V	V	V	M	P	S	T	P	Y	N	A	K	G	L	L	K	A	A	I	R	G	.	.	.	.	.	D	D	P
Template Known Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.					T		T	T								S														S	.	.	.	.	.	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	D	L	P	F	D	V	Q	V	A	E	I	E	F	D	P	D	M	Y	E	P	L	P	V	Y	K	P	A	A	S	R	M	Q	I	E	K	A	V	E	M	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S	V	P	V
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		V	V	F	L	E	P	K	I	L	Y	R	A	P	R	E	E	V	P	E	G	D	Y	V	V	E	I	G	K	A	.	.	.	.	.	.	.	.	.	.	.	R	V	A	R	E	G	D	D	V	T	L	V	T	Y	G	.	.	.	.	.	A	V	V	H	K	A	L	E	A	A	E	R	V	K	A	S	V
Template Known Secondary structure								G	G	G	S	S									S	S					T	T			.	.	.	.	.	.	.	.	.	.	.							S	S							T	.	.	.	.	.	T											T	S	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200												.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions