Job Description P77379 Confidence 98.54% Date Thu Jan 5 12:28:23 GMT 2012 Rank 15 Aligned Residues 144 % Identity 9% Template d2arca_ SCOP info Double-stranded beta-helix Regulatory protein AraC Regulatory protein AraC Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		G	T	I	D	K	N	C	V	L	G	S	D	W	Q	L	P	H	G	A	G	E	L	S	V	I	R	W	H	A	L	T	Q	G	A	A	K	L	E	M	P	T	G	E	I	F	T	L	R	P	G	N	V	V	L	L	P	Q	N	S	A	H	R	L	S	H	V	D	.	N	E	S	T	C	I	V	C	G	T	L	R
Query Conservation																																																																					.
Alig confidence																																									.																												.
Template Conservation																																									.
Template Sequence		A	G	L	T	P	I	E	A	N	G	Y	L	D	F	F	I	D	R	P	L	G	M	K	G	Y	I	L	N	L	T	I	R	G	Q	G	V	V	K	N	.	Q	G	R	E	F	V	C	R	P	G	D	I	L	L	F	P	P	G	E	I	H	H	Y	G	R	H	P	E	A	R	E	W	Y	H	Q	W	V	Y	F	R
Template Known Secondary structure									T	T	S	T	T		S					T	T			S	S																.	T	T							T	T							T	T									T	T	S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		L	Q	H	S	A	R	Y	F	L	.	T	S	L	P	E	T	L	F	L	A	P	V	N	H	S	V	E	Y	N	W	L	R	E	A	I	P	F	L	Q	Q	E	S	R	S	A	M	P	G	V	D	A	L	C	S	Q	I	C	A	T	F	F	T	L	A	V	R	E
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		P	R	A	Y	W	H	E	W	L	N	W	P	S	I	F	A	N	T	G	F	F	R	P	D	E	A	H	Q	P	H	F	S	D	L	F	G	Q	I	I	N	A	G	Q	G	E	G	R	Y	S	E	L	L	A	I	N	L	L	E	Q	L	L	L	R	R	M	E	A
Template Known Secondary structure				G	G	G	G	G	G								T	T								T	T	T																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions