 |
Job Description | P77379 | Confidence | 53.97% | Date | Thu Jan 5 12:28:23 GMT 2012 |
Rank | 465 | Aligned Residues | 48 |
% Identity | 13% | Template | d1ulya_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Hypothetical protein PH1932
|
Resolution | 2.50 |
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | K | N | I | L | S | L | L | L | H | P | R | L | G | A | V | I | Q | Q | M | L | E | M | P | G | H | A | W | T | V | E | S | L | A | S | I | A | H | M | S | R | A | S | F | A | Q | L | F | R | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
| . | . | . |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
T | D | P | E | V | I | K | V | X | L | E | D | T | R | R | K | I | L | K | L | L | . |
. |
. |
R | N | K | E | X | T | I | S | Q | L | S | E | I | L | G | K | T | P | Q | T | I | Y | H | H | I | E | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T |
|
| B |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|