Return to main results Retrieve Phyre Job Id

Job DescriptionP77379
Confidence97.04%DateThu Jan 5 12:28:23 GMT 2012
Rank20Aligned Residues65
% Identity9%Templatec3ibmB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.......
Predicted Secondary structure 
































Query SS confidence 

































































Query Sequence  GAGELSVIRWHALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHS
Query Conservation              
  
             
  
   
                             
Alig confidence 





















.










































Template Conservation    
 
   
   

 
 
   
.      
  

 
 

 
  
   
 
  


 



     
Template Sequence  TLERHEHTHVVMVVRGHAEVVL. DDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSDRD
Template Known Secondary structure 

BB
SS
S
.TT
TT

TT



SSS
SS

Template Predicted Secondary structure 







.

















Template SS confidence 

































































   68.70.........80......... 90.........100.........110.........120.........130..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions