Job Description P77379 Confidence 92.26% Date Thu Jan 5 12:28:23 GMT 2012 Rank 131 Aligned Residues 79 % Identity 10% Template c3cjdB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of putative tetr transcriptional regulator2 (yp_510936.1) from jannaschia sp. ccs1 at 1.79 a resolution Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	L	H	P	R	L	G	A	V	I	Q	Q	M	L	E	M	P	G	H	A	W	T	V	E	S	L	A	S	I	A	H	M	S	R	A	S	F	A	Q	L	F	R	D	V	S	G	T	T	P	L	A	V	L	T	K	L	R	L	Q	I	A	A	Q	M	F	S	R	E	T	L	P	V	V	V	I	A	E	S
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		A	A	L	R	E	K	L	I	D	L	A	E	A	Q	I	E	A	E	G	L	A	S	L	R	A	R	E	L	A	R	Q	A	D	C	A	V	G	A	I	Y	T	H	F	Q	D	L	N	A	.	.	L	T	L	E	V	N	G	R	T	F	A	R	L	G	A	A	V	G	A	V	D	H	P	N	E	R	L	I	A	X
Template Known Secondary structure																					G	G	G											T	S									S	S	S				.	.
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		252
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		94

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions