Job Description P77379 Confidence 54.07% Date Thu Jan 5 12:28:23 GMT 2012 Rank 464 Aligned Residues 72 % Identity 15% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

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		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.																																									.
Query SS confidence																					.	.	.	.	.	.	.	.																																									.
Query Sequence		T	V	E	S	L	A	S	I	A	H	M	S	R	A	S	F	A	Q	L	.	.	.	.	.	.	.	.	F	R	D	V	S	G	T	T	P	L	A	V	L	T	K	L	R	L	Q	I	A	A	Q	M	F	S	R	E	T	L	P	V	V	V	I	A	E	S	V	G	.	Y	A	S	E	S	S	F	H	K	A	F	V
Query Conservation																					.	.	.	.	.	.	.	.																																									.
Alig confidence																					.	.	.	.	.	.	.	.																							.																		.
Template Conservation																																																			.
Template Sequence		T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	.	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	K	E	W	K	Q	L	S	S
Template Known Secondary structure											T	S											T	T	S	S						T	T	T						T	T										.					T	T										T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		266	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		97	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions