Job Description P28629 Confidence 99.98% Date Wed Jan 25 15:20:47 GMT 2012 Rank 15 Aligned Residues 338 % Identity 11% Template d3bc8a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases SepSecS-like Resolution 1.65

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																		.	.	.																				.	.	.
Query SS confidence																		.	.	.																				.	.	.
Query Sequence		G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	.	.	.	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	.	.	.	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y	G	I
Query Conservation																		.	.	.																				.	.	.
Alig confidence																		.	.	.																				.	.	.																																						.	.
Template Conservation																																																																																.	.
Template Sequence		N	S	L	V	L	N	V	I	K	L	A	G	V	H	S	V	A	S	C	F	V	V	P	M	A	T	G	M	S	L	T	L	C	F	L	T	L	R	H	K	R	P	K	A	K	Y	I	I	W	P	R	I	D	Q	K	S	C	F	K	S	M	V	T	A	G	F	E	P	V	V	I	E	N	V	L	E	G	D	.	.
Template Known Secondary structure													T		T	T								S	S																		T	T																					T	T												T	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	D	.	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y
Query Conservation																																													.
Alig confidence		.	.	.	.	.																				.	.	.	.	.	.														.
Template Conservation		.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		.	.	.	.	.	E	L	R	T	D	L	K	A	V	E	A	K	I	Q	E	L	G	P	E	.	.	.	.	.	.	H	I	L	C	L	H	S	T	T	A	C	F	A	P	R	V	P	D	R	L	E	E	L	A	V	I	C	A	N	Y	D	I	P	H	V	V	N	N	A	Y	G	L	Q	S	S	K	C	M	H	L
Template Known Secondary structure		.	.	.	.	.																		G	G	.	.	.	.	.	.	G								S	S			T	T	B																T								T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
							197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D	G
Query Conservation
Alig confidence													.	.	.	.	.	.	.																										.	.	.	.																													.	.	.	.
Template Conservation													.	.	.	.	.	.	.																										.	.	.	.																													.	.	.	.
Template Sequence		I	Q	Q	G	A	R	V	G	R	I	D	.	.	.	.	.	.	.	A	F	V	Q	S	L	D	N	F	M	V	P	V	G	G	A	I	I	A	G	F	N	E	P	F	.	.	.	.	I	Q	D	I	S	K	M	Y	P	G	R	A	S	A	S	P	S	L	D	V	L	I	T	L	L	S	L	G	.	.	.	.	C
Template Known Secondary structure									S				.	.	.	.	.	.	.										S			S	S							S					.	.	.	.								S		S		B		S															.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.																										.	.	.	.																													.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.								.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.					330
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C	W	V	M	H	P	G	E	S	W	H	G
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	Y	R	K	L	L	K	E	R	K	E	M	F	V	Y	L	S	T	Q	L	K	K	L	A	E	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	R	L	L	Q	T	P	H	N	P	I	S	L	A	M
Template Known Secondary structure																													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			B				T	T		S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.																																					360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.		.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		F	K	D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	.	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R	T	T	D	F	Q	I	M	F	L	F	S	M	G	V	T	R	G	K	W	G	T	L	V	N	T	L	C
Query Conservation																																				.
Alig confidence																																				.
Template Conservation
Template Sequence		T	L	K	T	I	D	G	H	H	D	K	A	V	T	Q	L	G	S	M	L	F	T	R	Q	V	S	G	A	R	A	V	P	L	G	N	V	Q	T	V	S	G	H	T	F	R	G	F	M	S	H	A	D	N	Y	P	C	A	Y	L	N	A	A	A	A	I	G	M	K	M	Q	D	V	D	L	F	I	K	R	L	D
Template Known Secondary structure				T	T	T	S	S	S	S	S													T	T			S						S							T	T					T	T	T	T	T	S	S			S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	K	R	H	Y	D	A	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	C	L	N	I	V	R	K	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions