Job Description P28629 Confidence 100.00% Date Wed Jan 25 15:20:47 GMT 2012 Rank 9 Aligned Residues 312 % Identity 14% Template d2z67a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases SepSecS-like Resolution 2.50

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	T	D	N	D	V	.	.	.	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V	Y	M	V	P	S	R	N	R	Y	G	I	I	G	P	I	Y	P
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																																	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		L	E	S	F	F	K	Q	L	G	L	N	V	H	A	I	A	T	P	I	S	T	G	X	S	I	S	L	C	L	S	A	A	R	K	K	Y	G	S	N	V	V	I	Y	P	Y	A	S	H	K	S	P	I	K	A	V	S	F	V	G	X	N	X	R	L	V	E	T	V	L	D	G	D	.	.	.	.	.	.	.	R
Template Known Secondary structure									T	T									S	S																																							T	T												T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	.	D	G	V	C	Y	N	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L	H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y	A	D	H	Y	A	M
Query Conservation																																						.
Alig confidence																		.	.	.	.	.																.																																						.
Template Conservation																		.	.	.	.	.																																																						.
Template Sequence		V	Y	V	P	V	E	D	I	E	N	A	I	K	K	E	I	.	.	.	.	.	E	L	G	N	R	P	C	V	L	S	T	L	T	F	F	P	P	R	N	S	D	D	I	V	E	I	A	K	I	C	E	N	Y	D	I	P	H	I	I	N	G	A	Y	A	I	Q	N	N	Y	Y	L	E	K	.	L	K	K	A	F
Template Known Secondary structure																		.	.	.	.	.		T	T									S	S			T	T	B																T								T	T	T	T	T								.
Template Predicted Secondary structure																		.	.	.	.	.																																																						.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L	Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D	G	N	S	G	L	S	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.																									.	.	.																																		.	.	.	.
Template Conservation							.	.	.	.	.	.	.																									.	.	.																																		.	.	.	.
Template Sequence		K	Y	R	V	D	.	.	.	.	.	.	.	A	V	V	S	S	S	D	K	N	L	L	T	P	I	G	G	G	L	V	Y	S	T	D	A	.	.	.	E	F	I	K	E	I	S	L	S	Y	P	G	R	A	S	A	T	P	V	V	N	T	L	V	S	L	L	S	X	G	S	K	N	.	.	.	.	Y	L	E	L
Template Known Secondary structure		T	S			S	.	.	.	.	.	.	.														S	S							S			.	.	.								T	T	S		S		B		S																		.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.																									.	.	.																																		.	.	.	.
Template SS confidence
		266	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T	T	V	Q	D	C	W	V	M	H	P	G	E	S	W	H	G	F	K	D	I	P	D
Query Conservation
Alig confidence																									.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	N	Q	K	N	S	K	K	L	L	D	E	L	L	N	D	L	S	K	K	T	G	.	.	.	.	.	.	G	K	F	L	D	V	E	S	P	I	A	S	C	I	S	V	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							S	S	.	.	.	.	.	.			B						S	S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.							.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R	T	T	D	F	Q	I	M	F	L	F	S	M	G	V	T	R	G	K	W	G	T	L	V	N	T	L	C	S	F
Query Conservation
Alig confidence		.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	D	P	V	E	I	A	A	K	L	Y	N	L	R	V	T	G	P	R	G	I	.	.	.	.	.	.	.	.	K	K	T	D	H	F	G	N	C	Y	L	G	T	Y	T	H	D	Y	I	V	X	N	A	A	I	G	V	R	T	E	D	I	V	N	S	V	S	K	L	E	K	I
Template Known Secondary structure		.	.	.	.	.												T	T			S					.	.	.	.	.	.	.	.		T	T						T		S	S			S										T	T															T
Template Predicted Secondary structure		.	.	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
							373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.									.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions