Job Description P28629 Confidence 99.49% Date Wed Jan 25 15:20:47 GMT 2012 Rank 210 Aligned Residues 293 % Identity 12% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		R	T	S	L	G	S	L	L	D	H	T	G	A	F	G	E	S	E	K	Y	A	A	R	V	F	G	A	D	R	S	W	S	V	V	V	G	T	S	G	S	N	R	T	I	M	Q	A	C	M	.	.	.	T	D	N	D	V	V	V	V	D	R	N	C	H	K	S	I	E	Q	G	L	M	L	T	G	A	K	P	V
Query Conservation																																																			.	.	.
Alig confidence																																																			.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	K	G	T	S	F	G	A	P	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P	S	V	E	M	V	R	F	V	N	S	G	T	E	A	C	M	A	V	L	R	L	M	R	A	Y	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T		S			S	S																	S	S		S						S	S																	T									T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																							.	.	.							.	.	.
Query SS confidence																																																							.	.	.							.	.	.
Query Sequence		Y	M	V	P	S	R	N	R	Y	G	I	I	G	P	I	Y	P	Q	E	M	Q	P	E	T	L	Q	K	K	I	S	E	S	P	L	T	K	D	K	A	G	Q	K	P	S	Y	C	V	V	T	N	C	T	Y	.	.	.	D	G	V	C	Y	N	.	.	.	A	K	E	A	Q	D	L	L	E	K	T	S	D	R	L
Query Conservation																																																							.	.	.							.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.													.	.	.							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	H	A	A	T	L	T	A	P	Y	N	D	L	E	A	V	S	R	L	F	E	Q	Y	P	.	.	.	.	.	.	.	.	N	D	I	A	G	V	I	L	E	P	V	V	G	N	A	G	F	I	P	P	D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.										T	T												S	T	.	.	.	.	.	.	.	.	T	T								S	S	B		S	S	S		B				T	T												T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
											130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.									.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	D	E	A	W	Y	G	Y	A	R	F	N	P	I	Y	A	D	H	Y	A	M	R	G	E	P	G	D	H	N	G	P	T	V	F	A	T	H	S	T	H	K	L	L	N	A	L	S	Q	A	S	Y	I	H	V	R	E	G	R	G	A	I	N	F	S	R	F	N	Q	A	Y	M	M	H	A	T	T	S	P	L
Query Conservation
Alig confidence										.								.											.	.	.	.	.	.	.						.	.														.	.	.	.	.	.	.
Template Conservation										.								.											.	.	.	.	.	.	.						.	.														.	.	.	.	.	.	.
Template Sequence		V	F	D	E	V	M	T	G	.	F	R	I	A	Y	G	G	.	A	Q	E	K	F	G	V	T	P	D	.	.	.	.	.	.	.	L	T	T	L	G	.	.	K	V	I	G	G	G	L	P	V	G	A	Y	G	.	.	.	.	.	.	.	G	R	A	E	I	M	K	M	V	A	P	A	G	P	T	L	S	G	N
Template Known Secondary structure						T	T	T	T	.	T	T	T		T	T		.						T				S	.	.	.	.	.	.	.						.	.	G	G	G	G	T	T	S							.	.	.	.	.	.	.							T	T	S		T	T
Template Predicted Secondary structure										.								.											.	.	.	.	.	.	.						.	.														.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.		.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.								.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.								.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	I	C	A	S	N	D	V	A	V	S	M	M	D	G	N	S	G	L	S	L	T	Q	E	V	I	D	E	A	V	D	F	R	Q	A	M	A	R	L	Y	K	E	F	T	A	D	G	S	W	F	F	K	P	W	N	K	E	V	V	T	D	P	Q	T	G	K	T	Y	D	F	A	D	A	P	T	K	L	L	T
Query Conservation
Alig confidence																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	.	.	.	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	S	T	.	.	.	T																						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.													.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	Q	D	C	W	V	M	H	P	G	E	S	W	H	G	F	K	D	I	P	D	N	W	S	M	L	D	P	I	K	V	S	I	L	A	P	G	M	G	E	D	G	E	L	E	E	T	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	V	T	A	W	L	G	R	H	G	I	V	P	T	R
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	H	E	V	C	G	G	H	I	S	G	M	F	G	L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S	D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									T	T						S	S	S				S	S					T	T	S															T	T					S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																													328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	D	F	Q	I	M	F	L	F	S	M	G	V	T	R	G	K	W	G	T	L	V	N	T	L	C	S	F	K	R	H	Y
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		S	Q	.	.	F	E	A	G	F	T	S	L	A	H	T	E	A	D	I	E	R	T	I	A	A	A	R	T	V	L	S	Q	L
Template Known Secondary structure		S	T	.	.	T	S						T	T																		T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		381	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions