Return to main results Retrieve Phyre Job Id

Job DescriptionP28629
Confidence99.71%DateWed Jan 25 15:20:47 GMT 2012
Rank136Aligned Residues294
% Identity14%Templated2c0ra1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220... ......230.........240.........250....... ..260.........270.........280
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Query Sequence  AFGESEKYAARVFGADRS. . . WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKS. . IEQGLMLTGAKPVYMVPSRNRYG
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Template Sequence  VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASN. .
Template Known Secondary structure  TT

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   50.........60.........70.........80.........90.........100.........110.........120.......
 
   281........290.........300.........310.........320. ........330.........340.........350.........
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Query Sequence  IIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC. TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPI
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Template Sequence  . . . . . . . . YMTLPKLQEIQLQD. . . . . . . . . NAAYLHLTSNETIEGAQFK. . . . . AFPDTGSVPLIGDMSSDI. . . . . . .
Template Known Secondary structure  ........T
S


GGG



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   128.130.........140. ........150.........160 .........170........
 
   360.........370.........380.........390.........400.. .......410.........420.........430
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Query Sequence  YADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG. . . . . . . . . RGAINFSRFNQAYMMHATTSPLYAICAS
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Template Sequence  . . LSRPFDLNQFG. . . . . . LVYAGAQKNL. GPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYN. . TPPSFGIYM
Template Known Secondary structure  ..TSS


GGG
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   179180......... 190......... 200.........210.........220.........230........ .240.......
 
   431........440... ......450.........460.........470.........480.........490.........500.........
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Query Sequence  NDVAVSMMDGNSG. LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDC
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Template Sequence  VNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTSTTSSSS
GGGB................................
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   248.250.........260.........270.........280.........290.....
 
   510.........520.........530.........540.........550.........560.........570.. .......580.......
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Query Sequence  WVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTR. . TTDFQIMFLFSMGVT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . SDMNITFRLAS. . . . . . . . . . EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVP
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SS
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B

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   296...300...... ...310.........320.........330.........340...
 
   588.590.........600.....
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Query Sequence  RGKWGTLVNTLCSFKRHY
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Template Sequence  YESCEALVQFMEHFKRSR
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   344.....350.........360.
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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