Return to main results Retrieve Phyre Job Id

Job DescriptionP28629
Confidence99.92%DateWed Jan 25 15:20:47 GMT 2012
Rank24Aligned Residues294
% Identity14%Templated1vjoa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220 .........230.........240.........250.........260. ........270.........280.
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Query Sequence  AFGESEKYAARVFGA. . DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG. . LMLTGAKPVYMVPSRNRYGI
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Template Sequence  LXDEIQSLLRYVWQTENPLTIAVSGTGTAAXEATIANAVEPGDVVLIGVAGYFGNRLVDXAGRYGADVRTISKPWGE. . .
Template Known Secondary structure  T


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TT
SSTT


TT
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   56...60.........70.........80.........90.........100.........110.........120.........130..
 
   282.......290.........300.........310.........320 .........330.........340.........350.........360
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Query Sequence  IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN. CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY
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Template Conservation  .......  
 
 
  

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Template Sequence  . . . . . . . VFSLEELRTALETH. . . . . . . . . RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLD
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SSTTTT


TTT

TTTTTTS


TT
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   133......140...... ...150.........160.........170.........180.........190......
 
   361........370.........380.........390.........400.........410........
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Query Sequence  ADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . AWGVD. . . . . . . LAYSCSQKGLGCSPGASPFT. . . . . . . XSSRAIEKLQRRRTKVANWYLDXNLLGKYWGSERV
Template Known Secondary structure  ......TTT
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SSSTT
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SS
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T
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S
STT
STT

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   197..200. ........210.........220. ........230.........240.........250......
 
   419420.........430.........440.........450.........460.........470.........480.........490........
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Query Sequence  ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADA
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Template Sequence  YHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG. . . . . . . . . . LSLHVEKEYR. . . . . . . . . . . . .
Template Known Secondary structure 

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TT..........

BSS
GGGB.............
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   257..260.........270.........280.........290.........300... ......310...
 
   499500.........510.........520.........530.........540.........550.........560.........570.. ..
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Query Sequence  PTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTR. . . . TT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LPTLTTVCIPD. GVDGKA. . . . . . . . VARRLLNEHNIEVGGGLGELA
Template Known Secondary structure  .................................
SS

T.T

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GGGT
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   314.....320.... .....330 .........340.........350.
 
   575... .580.........590.........600...
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Query Sequence  DFQI. MFLFSMGVTRGKWGTLVNTLCSFKR
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Template Sequence  GKVWRVGLXGFNSRKESVDQLIPALEQVLR
Template Known Secondary structure  TT

GGG
S
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   352.......360.........370.........380.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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