Return to main results Retrieve Phyre Job Id

Job DescriptionP28629
Confidence99.84%DateWed Jan 25 15:20:47 GMT 2012
Rank66Aligned Residues319
% Identity16%Templated1v72a1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  ENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE. . .
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Template Sequence  PEVAQALVK. HSSGQAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECG
Template Known Secondary structure  .TTSS


STT
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S
TS

TT
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   22.......30 .........40.........50.........60.........70.........80.........90.........100
 
   260.........270.........280.........290.........300.........310.........320.........330. ....
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Query Sequence  . QGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAK. . . EAQD
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Template Sequence  APEFFSNGAKLMTVDGP. . . . . . . . . . . AAKLDIVRLRERTREKV. . GDVHTTQPACVSITQATEVGSIYTLDEIEAIGD
Template Known Secondary structure  TTS



G...........GG


TTSST..T
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   101........110....... ..120.........130.... .....140.........150.........160.......
 
   336...340.........350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  LLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY
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Template Sequence  VCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVD. . . . . . ALSFGATKNGVLAAEAIVLFNTSL. . . . . ATEMSYRR
Template Known Secondary structure  TT
TTT

TTTTTGGGT

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SSGGG.....
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   168.170.........180.........190.........200.... .....210.........220........ .230......
 
   416...420.........430.........440.........450.........460.........470.........480.........490.....
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Query Sequence  MMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDF
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Template Sequence  KRAGHLSSKMRFLSAQ. . IDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGT. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT


SST..TSTTTT
TTS

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   237..240.........250.. .......260.........270.........280.........290..
 
   496...500.........510.........520.........530.........540.........550.........560.... .....570....
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Query Sequence  ADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG. RHGIVPTRTT
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Template Conservation  ....................................    
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EANILFCRL. . . . . . . . . . . . . . DSAMIDALLKAGFGFYHDRWG
Template Known Secondary structure  ....................................
SS..............
TT
B
B
SSSS
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   293......300. ........310.........320..
 
   575....580.........590.........600
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Query Sequence  DFQIMFLFSMGVTRGKWGTLVNTLCS
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Template Sequence  PNVVRFVTSFATTAEDVDHLLNQVRL
Template Known Secondary structure  TT

TT

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   323......330.........340........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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